Gene : AT4G31985 A. thaliana TAIR10
Defline:  (1 of 3) K02924 - large subunit ribosomal protein L39e (RP-L39e, RPL39) Genomic Order:  3254
Name:  ? AT4G31985 Secondary Identifier:  ? PAC:19647898
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G31985 0.5kb upstream 0.5kb upstream 1165 true Chr4: 15469395-15470559 Arabidopsis thaliana
AT4G31985 0.5kb upstream 0.5kb upstream 500 false Chr4: 15469395-15469894 Arabidopsis thaliana
AT4G31985 0.5kb downstream 0.5kb downstream 1165 true Chr4: 15469895-15471059 Arabidopsis thaliana
AT4G31985 0.5kb downstream 0.5kb downstream 500 false Chr4: 15470560-15471059 Arabidopsis thaliana
AT4G31985 1.0kb upstream 1.0kb upstream 1665 true Chr4: 15468895-15470559 Arabidopsis thaliana
AT4G31985 1.0kb upstream 1.0kb upstream 1000 false Chr4: 15468895-15469894 Arabidopsis thaliana
AT4G31985 1.0kb downstream 1.0kb downstream 1665 true Chr4: 15469895-15471559 Arabidopsis thaliana
AT4G31985 1.0kb downstream 1.0kb downstream 1000 false Chr4: 15470560-15471559 Arabidopsis thaliana
AT4G31985 2.0kb upstream 2.0kb upstream 2665 true Chr4: 15467895-15470559 Arabidopsis thaliana
AT4G31985 2.0kb upstream 2.0kb upstream 2000 false Chr4: 15467895-15469894 Arabidopsis thaliana
AT4G31985 2.0kb downstream 2.0kb downstream 2665 true Chr4: 15469895-15472559 Arabidopsis thaliana
AT4G31985 2.0kb downstream 2.0kb downstream 2000 false Chr4: 15470560-15472559 Arabidopsis thaliana
AT4G31985 5.0kb upstream 5.0kb upstream 5665 true Chr4: 15464895-15470559 Arabidopsis thaliana
AT4G31985 5.0kb upstream 5.0kb upstream 5000 false Chr4: 15464895-15469894 Arabidopsis thaliana
AT4G31985 5.0kb downstream 5.0kb downstream 5665 true Chr4: 15469895-15475559 Arabidopsis thaliana
AT4G31985 5.0kb downstream 5.0kb downstream 5000 false Chr4: 15470560-15475559 Arabidopsis thaliana
AT4G31985 10.0kb upstream 10.0kb upstream 10665 true Chr4: 15459895-15470559 Arabidopsis thaliana
AT4G31985 10.0kb upstream 10.0kb upstream 10000 false Chr4: 15459895-15469894 Arabidopsis thaliana
AT4G31985 10.0kb downstream 10.0kb downstream 10665 true Chr4: 15469895-15480559 Arabidopsis thaliana
AT4G31985 10.0kb downstream 10.0kb downstream 10000 false Chr4: 15470560-15480559 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376762 5261 Brassicaceae View MSA
123839816 5264 Brassicales-Malvales View MSA
124350503 5266 SBM View MSA
124253022 5268 Malvidae View MSA
124071579 5270 Rosid View MSA
123745960 5271 Pentapetalae View MSA
122796201 5272 Eudicot View MSA
122050274 5273 Angiosperm View MSA
121348597 5274 Embryophyte View MSA
123424363 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 112.368     High  
cufflinks 149.999     High  
cufflinks 97.177     High  
cufflinks 150.522     High  
cufflinks 85.352     High Low
cufflinks 172.53     High High

0 Strain