Gene : AT4G33800 A. thaliana TAIR10
Genomic Order:  3453 Name:  ? AT4G33800
Secondary Identifier:  ? PAC:19648261
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G33800 0.5kb upstream 0.5kb upstream 1901 true Chr4: 16210009-16211909 Arabidopsis thaliana
AT4G33800 0.5kb upstream 0.5kb upstream 500 false Chr4: 16211410-16211909 Arabidopsis thaliana
AT4G33800 0.5kb downstream 0.5kb downstream 1901 true Chr4: 16209509-16211409 Arabidopsis thaliana
AT4G33800 0.5kb downstream 0.5kb downstream 500 false Chr4: 16209509-16210008 Arabidopsis thaliana
AT4G33800 1.0kb upstream 1.0kb upstream 2401 true Chr4: 16210009-16212409 Arabidopsis thaliana
AT4G33800 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16211410-16212409 Arabidopsis thaliana
AT4G33800 1.0kb downstream 1.0kb downstream 2401 true Chr4: 16209009-16211409 Arabidopsis thaliana
AT4G33800 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16209009-16210008 Arabidopsis thaliana
AT4G33800 2.0kb upstream 2.0kb upstream 3401 true Chr4: 16210009-16213409 Arabidopsis thaliana
AT4G33800 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16211410-16213409 Arabidopsis thaliana
AT4G33800 2.0kb downstream 2.0kb downstream 3401 true Chr4: 16208009-16211409 Arabidopsis thaliana
AT4G33800 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16208009-16210008 Arabidopsis thaliana
AT4G33800 5.0kb upstream 5.0kb upstream 6401 true Chr4: 16210009-16216409 Arabidopsis thaliana
AT4G33800 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16211410-16216409 Arabidopsis thaliana
AT4G33800 5.0kb downstream 5.0kb downstream 6401 true Chr4: 16205009-16211409 Arabidopsis thaliana
AT4G33800 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16205009-16210008 Arabidopsis thaliana
AT4G33800 10.0kb upstream 10.0kb upstream 11401 true Chr4: 16210009-16221409 Arabidopsis thaliana
AT4G33800 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16211410-16221409 Arabidopsis thaliana
AT4G33800 10.0kb downstream 10.0kb downstream 11401 true Chr4: 16200009-16211409 Arabidopsis thaliana
AT4G33800 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16200009-16210008 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041442 5273 Angiosperm View MSA
122362263 5261 Brassicaceae View MSA
123832582 5264 Brassicales-Malvales View MSA
124346420 5266 SBM View MSA
124253847 5268 Malvidae View MSA
124069670 5270 Rosid View MSA
123751120 5271 Pentapetalae View MSA
122785987 5272 Eudicot View MSA
121309846 5274 Embryophyte View MSA
123347492 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.084     Low  
cufflinks 0.853        
cufflinks 0.01     Low Low
cufflinks 2.592       High
cufflinks 0.02     Low  
cufflinks 1.433        

0 Strain