Gene : AT4G33620 A. thaliana TAIR10
Defline:  (1 of 1) PTHR24365:SF297 - UBIQUITIN-LIKE-SPECIFIC PROTEASE 2A-RELATED Genomic Order:  3434
Name:  ? AT4G33620 Secondary Identifier:  ? PAC:19648953
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G33620 0.5kb upstream 0.5kb upstream 5662 true Chr4: 16147192-16152853 Arabidopsis thaliana
AT4G33620 0.5kb upstream 0.5kb upstream 500 false Chr4: 16147192-16147691 Arabidopsis thaliana
AT4G33620 0.5kb downstream 0.5kb downstream 5662 true Chr4: 16147692-16153353 Arabidopsis thaliana
AT4G33620 0.5kb downstream 0.5kb downstream 500 false Chr4: 16152854-16153353 Arabidopsis thaliana
AT4G33620 1.0kb upstream 1.0kb upstream 6162 true Chr4: 16146692-16152853 Arabidopsis thaliana
AT4G33620 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16146692-16147691 Arabidopsis thaliana
AT4G33620 1.0kb downstream 1.0kb downstream 6162 true Chr4: 16147692-16153853 Arabidopsis thaliana
AT4G33620 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16152854-16153853 Arabidopsis thaliana
AT4G33620 2.0kb upstream 2.0kb upstream 7162 true Chr4: 16145692-16152853 Arabidopsis thaliana
AT4G33620 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16145692-16147691 Arabidopsis thaliana
AT4G33620 2.0kb downstream 2.0kb downstream 7162 true Chr4: 16147692-16154853 Arabidopsis thaliana
AT4G33620 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16152854-16154853 Arabidopsis thaliana
AT4G33620 5.0kb upstream 5.0kb upstream 10162 true Chr4: 16142692-16152853 Arabidopsis thaliana
AT4G33620 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16142692-16147691 Arabidopsis thaliana
AT4G33620 5.0kb downstream 5.0kb downstream 10162 true Chr4: 16147692-16157853 Arabidopsis thaliana
AT4G33620 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16152854-16157853 Arabidopsis thaliana
AT4G33620 10.0kb upstream 10.0kb upstream 15162 true Chr4: 16137692-16152853 Arabidopsis thaliana
AT4G33620 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16137692-16147691 Arabidopsis thaliana
AT4G33620 10.0kb downstream 10.0kb downstream 15162 true Chr4: 16147692-16162853 Arabidopsis thaliana
AT4G33620 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16152854-16162853 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366101 5261 Brassicaceae View MSA
123828888 5264 Brassicales-Malvales View MSA
124321563 5266 SBM View MSA
124248250 5268 Malvidae View MSA
124038183 5270 Rosid View MSA
123752734 5271 Pentapetalae View MSA
122792289 5272 Eudicot View MSA
122048502 5273 Angiosperm View MSA
123429184 5275 Viridiplantae View MSA
121351341 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.11        
cufflinks 2.142        
cufflinks 1.329       Low
cufflinks 2.624       High
cufflinks 1.542        
cufflinks 1.945        

0 Strain