Gene : AT4G33100 A. thaliana TAIR10
Defline:  (1 of 1) KOG3481 - Uncharacterized conserved protein Genomic Order:  3378
Name:  ? AT4G33100 Secondary Identifier:  ? PAC:19644428
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G33100 0.5kb upstream 0.5kb upstream 1816 true Chr4: 15970674-15972489 Arabidopsis thaliana
AT4G33100 0.5kb upstream 0.5kb upstream 500 false Chr4: 15970674-15971173 Arabidopsis thaliana
AT4G33100 0.5kb downstream 0.5kb downstream 1816 true Chr4: 15971174-15972989 Arabidopsis thaliana
AT4G33100 0.5kb downstream 0.5kb downstream 500 false Chr4: 15972490-15972989 Arabidopsis thaliana
AT4G33100 1.0kb upstream 1.0kb upstream 2316 true Chr4: 15970174-15972489 Arabidopsis thaliana
AT4G33100 1.0kb upstream 1.0kb upstream 1000 false Chr4: 15970174-15971173 Arabidopsis thaliana
AT4G33100 1.0kb downstream 1.0kb downstream 2316 true Chr4: 15971174-15973489 Arabidopsis thaliana
AT4G33100 1.0kb downstream 1.0kb downstream 1000 false Chr4: 15972490-15973489 Arabidopsis thaliana
AT4G33100 2.0kb upstream 2.0kb upstream 3316 true Chr4: 15969174-15972489 Arabidopsis thaliana
AT4G33100 2.0kb upstream 2.0kb upstream 2000 false Chr4: 15969174-15971173 Arabidopsis thaliana
AT4G33100 2.0kb downstream 2.0kb downstream 3316 true Chr4: 15971174-15974489 Arabidopsis thaliana
AT4G33100 2.0kb downstream 2.0kb downstream 2000 false Chr4: 15972490-15974489 Arabidopsis thaliana
AT4G33100 5.0kb upstream 5.0kb upstream 6316 true Chr4: 15966174-15972489 Arabidopsis thaliana
AT4G33100 5.0kb upstream 5.0kb upstream 5000 false Chr4: 15966174-15971173 Arabidopsis thaliana
AT4G33100 5.0kb downstream 5.0kb downstream 6316 true Chr4: 15971174-15977489 Arabidopsis thaliana
AT4G33100 5.0kb downstream 5.0kb downstream 5000 false Chr4: 15972490-15977489 Arabidopsis thaliana
AT4G33100 10.0kb upstream 10.0kb upstream 11316 true Chr4: 15961174-15972489 Arabidopsis thaliana
AT4G33100 10.0kb upstream 10.0kb upstream 10000 false Chr4: 15961174-15971173 Arabidopsis thaliana
AT4G33100 10.0kb downstream 10.0kb downstream 11316 true Chr4: 15971174-15982489 Arabidopsis thaliana
AT4G33100 10.0kb downstream 10.0kb downstream 10000 false Chr4: 15972490-15982489 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366657 5261 Brassicaceae View MSA
123834050 5264 Brassicales-Malvales View MSA
124342948 5266 SBM View MSA
124241194 5268 Malvidae View MSA
124065636 5270 Rosid View MSA
123737457 5271 Pentapetalae View MSA
122786925 5272 Eudicot View MSA
122043759 5273 Angiosperm View MSA
121347036 5274 Embryophyte View MSA
123380483 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.852        
cufflinks 13.424        
cufflinks 3.646       Low
cufflinks 12.582        
cufflinks 4.651        
cufflinks 12.128        

0 Strain