Gene : NRPB1 A. thaliana TAIR10
Primary Identifier:  ? AT4G35800 Defline:  (1 of 1) K03006 - DNA-directed RNA polymerase II subunit RPB1 (RPB1, POLR2A)
Genomic Order:  3674 Name:  ? AT4G35800
Secondary Identifier:  ? PAC:19644904
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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G35800 0.5kb upstream 0.5kb upstream 7972 true Chr4: 16960657-16968628 Arabidopsis thaliana
AT4G35800 0.5kb upstream 0.5kb upstream 500 false Chr4: 16968129-16968628 Arabidopsis thaliana
AT4G35800 0.5kb downstream 0.5kb downstream 7972 true Chr4: 16960157-16968128 Arabidopsis thaliana
AT4G35800 0.5kb downstream 0.5kb downstream 500 false Chr4: 16960157-16960656 Arabidopsis thaliana
AT4G35800 1.0kb upstream 1.0kb upstream 8472 true Chr4: 16960657-16969128 Arabidopsis thaliana
AT4G35800 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16968129-16969128 Arabidopsis thaliana
AT4G35800 1.0kb downstream 1.0kb downstream 8472 true Chr4: 16959657-16968128 Arabidopsis thaliana
AT4G35800 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16959657-16960656 Arabidopsis thaliana
AT4G35800 2.0kb upstream 2.0kb upstream 9472 true Chr4: 16960657-16970128 Arabidopsis thaliana
AT4G35800 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16968129-16970128 Arabidopsis thaliana
AT4G35800 2.0kb downstream 2.0kb downstream 9472 true Chr4: 16958657-16968128 Arabidopsis thaliana
AT4G35800 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16958657-16960656 Arabidopsis thaliana
AT4G35800 5.0kb upstream 5.0kb upstream 12472 true Chr4: 16960657-16973128 Arabidopsis thaliana
AT4G35800 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16968129-16973128 Arabidopsis thaliana
AT4G35800 5.0kb downstream 5.0kb downstream 12472 true Chr4: 16955657-16968128 Arabidopsis thaliana
AT4G35800 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16955657-16960656 Arabidopsis thaliana
AT4G35800 10.0kb upstream 10.0kb upstream 17472 true Chr4: 16960657-16978128 Arabidopsis thaliana
AT4G35800 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16968129-16978128 Arabidopsis thaliana
AT4G35800 10.0kb downstream 10.0kb downstream 17472 true Chr4: 16950657-16968128 Arabidopsis thaliana
AT4G35800 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16950657-16960656 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041040 5273 Angiosperm View MSA
122367215 5261 Brassicaceae View MSA
123829151 5264 Brassicales-Malvales View MSA
124338687 5266 SBM View MSA
124237204 5268 Malvidae View MSA
124064405 5270 Rosid View MSA
123740882 5271 Pentapetalae View MSA
122790504 5272 Eudicot View MSA
121343935 5274 Embryophyte View MSA
123424077 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.544        
cufflinks 28.839        
cufflinks 20.303       Low
cufflinks 30.426     High High
cufflinks 22.654        
cufflinks 29.692     High  

0 Strain