Gene : AT4G37220 A. thaliana TAIR10
Defline:  (1 of 4) PTHR33596//PTHR33596:SF1 - FAMILY NOT NAMED // COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED Genomic Order:  3822
Name:  ? AT4G37220 Secondary Identifier:  ? PAC:19647884
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G37220 0.5kb upstream 0.5kb upstream 1583 true Chr4: 17514580-17516162 Arabidopsis thaliana
AT4G37220 0.5kb upstream 0.5kb upstream 500 false Chr4: 17514580-17515079 Arabidopsis thaliana
AT4G37220 0.5kb downstream 0.5kb downstream 1583 true Chr4: 17515080-17516662 Arabidopsis thaliana
AT4G37220 0.5kb downstream 0.5kb downstream 500 false Chr4: 17516163-17516662 Arabidopsis thaliana
AT4G37220 1.0kb upstream 1.0kb upstream 2083 true Chr4: 17514080-17516162 Arabidopsis thaliana
AT4G37220 1.0kb upstream 1.0kb upstream 1000 false Chr4: 17514080-17515079 Arabidopsis thaliana
AT4G37220 1.0kb downstream 1.0kb downstream 2083 true Chr4: 17515080-17517162 Arabidopsis thaliana
AT4G37220 1.0kb downstream 1.0kb downstream 1000 false Chr4: 17516163-17517162 Arabidopsis thaliana
AT4G37220 2.0kb upstream 2.0kb upstream 3083 true Chr4: 17513080-17516162 Arabidopsis thaliana
AT4G37220 2.0kb upstream 2.0kb upstream 2000 false Chr4: 17513080-17515079 Arabidopsis thaliana
AT4G37220 2.0kb downstream 2.0kb downstream 3083 true Chr4: 17515080-17518162 Arabidopsis thaliana
AT4G37220 2.0kb downstream 2.0kb downstream 2000 false Chr4: 17516163-17518162 Arabidopsis thaliana
AT4G37220 5.0kb upstream 5.0kb upstream 6083 true Chr4: 17510080-17516162 Arabidopsis thaliana
AT4G37220 5.0kb upstream 5.0kb upstream 5000 false Chr4: 17510080-17515079 Arabidopsis thaliana
AT4G37220 5.0kb downstream 5.0kb downstream 6083 true Chr4: 17515080-17521162 Arabidopsis thaliana
AT4G37220 5.0kb downstream 5.0kb downstream 5000 false Chr4: 17516163-17521162 Arabidopsis thaliana
AT4G37220 10.0kb upstream 10.0kb upstream 11083 true Chr4: 17505080-17516162 Arabidopsis thaliana
AT4G37220 10.0kb upstream 10.0kb upstream 10000 false Chr4: 17505080-17515079 Arabidopsis thaliana
AT4G37220 10.0kb downstream 10.0kb downstream 11083 true Chr4: 17515080-17526162 Arabidopsis thaliana
AT4G37220 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17516163-17526162 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366593 5261 Brassicaceae View MSA
123837629 5264 Brassicales-Malvales View MSA
124338264 5266 SBM View MSA
124246161 5268 Malvidae View MSA
124069489 5270 Rosid View MSA
123743524 5271 Pentapetalae View MSA
122795591 5272 Eudicot View MSA
122043105 5273 Angiosperm View MSA
121346555 5274 Embryophyte View MSA
123380405 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.185     Low Low
cufflinks 0.688        
cufflinks 1.072        
cufflinks 0.68        
cufflinks 1.376       High
cufflinks 0.527        

0 Strain