Gene : IRX14 A. thaliana TAIR10
Primary Identifier:  ? AT4G36890 Defline:  (1 of 2) PTHR10896//PTHR10896:SF17 - GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE // BETA-1,4-XYLOSYLTRANSFERASE IRX14-RELATED
Genomic Order:  3784 Name:  ? AT4G36890
Secondary Identifier:  ? PAC:19648755
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5800 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G36890 0.5kb upstream 0.5kb upstream 3106 true Chr4: 17379175-17382280 Arabidopsis thaliana
AT4G36890 0.5kb upstream 0.5kb upstream 500 false Chr4: 17381781-17382280 Arabidopsis thaliana
AT4G36890 0.5kb downstream 0.5kb downstream 3106 true Chr4: 17378675-17381780 Arabidopsis thaliana
AT4G36890 0.5kb downstream 0.5kb downstream 500 false Chr4: 17378675-17379174 Arabidopsis thaliana
AT4G36890 1.0kb upstream 1.0kb upstream 3606 true Chr4: 17379175-17382780 Arabidopsis thaliana
AT4G36890 1.0kb upstream 1.0kb upstream 1000 false Chr4: 17381781-17382780 Arabidopsis thaliana
AT4G36890 1.0kb downstream 1.0kb downstream 3606 true Chr4: 17378175-17381780 Arabidopsis thaliana
AT4G36890 1.0kb downstream 1.0kb downstream 1000 false Chr4: 17378175-17379174 Arabidopsis thaliana
AT4G36890 2.0kb upstream 2.0kb upstream 4606 true Chr4: 17379175-17383780 Arabidopsis thaliana
AT4G36890 2.0kb upstream 2.0kb upstream 2000 false Chr4: 17381781-17383780 Arabidopsis thaliana
AT4G36890 2.0kb downstream 2.0kb downstream 4606 true Chr4: 17377175-17381780 Arabidopsis thaliana
AT4G36890 2.0kb downstream 2.0kb downstream 2000 false Chr4: 17377175-17379174 Arabidopsis thaliana
AT4G36890 5.0kb upstream 5.0kb upstream 7606 true Chr4: 17379175-17386780 Arabidopsis thaliana
AT4G36890 5.0kb upstream 5.0kb upstream 5000 false Chr4: 17381781-17386780 Arabidopsis thaliana
AT4G36890 5.0kb downstream 5.0kb downstream 7606 true Chr4: 17374175-17381780 Arabidopsis thaliana
AT4G36890 5.0kb downstream 5.0kb downstream 5000 false Chr4: 17374175-17379174 Arabidopsis thaliana
AT4G36890 10.0kb upstream 10.0kb upstream 12606 true Chr4: 17379175-17391780 Arabidopsis thaliana
AT4G36890 10.0kb upstream 10.0kb upstream 10000 false Chr4: 17381781-17391780 Arabidopsis thaliana
AT4G36890 10.0kb downstream 10.0kb downstream 12606 true Chr4: 17369175-17381780 Arabidopsis thaliana
AT4G36890 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17369175-17379174 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041384 5273 Angiosperm View MSA
122375981 5261 Brassicaceae View MSA
123840009 5264 Brassicales-Malvales View MSA
124337936 5266 SBM View MSA
124241535 5268 Malvidae View MSA
124066029 5270 Rosid View MSA
123737943 5271 Pentapetalae View MSA
122790258 5272 Eudicot View MSA
121350855 5274 Embryophyte View MSA
123381907 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.037        
cufflinks 18.783        
cufflinks 10.93       Low
cufflinks 21.05        
cufflinks 10.972       Low
cufflinks 23.116       High

0 Strain