Gene : AT4G38640 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12385//PTHR12385:SF44 - CTL TRANSPORTER // PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN Genomic Order:  3971
Name:  ? AT4G38640 Secondary Identifier:  ? PAC:19645224
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G38640 0.5kb upstream 0.5kb upstream 3137 true Chr4: 18059653-18062789 Arabidopsis thaliana
AT4G38640 0.5kb upstream 0.5kb upstream 500 false Chr4: 18062290-18062789 Arabidopsis thaliana
AT4G38640 0.5kb downstream 0.5kb downstream 3137 true Chr4: 18059153-18062289 Arabidopsis thaliana
AT4G38640 0.5kb downstream 0.5kb downstream 500 false Chr4: 18059153-18059652 Arabidopsis thaliana
AT4G38640 1.0kb upstream 1.0kb upstream 3637 true Chr4: 18059653-18063289 Arabidopsis thaliana
AT4G38640 1.0kb upstream 1.0kb upstream 1000 false Chr4: 18062290-18063289 Arabidopsis thaliana
AT4G38640 1.0kb downstream 1.0kb downstream 3637 true Chr4: 18058653-18062289 Arabidopsis thaliana
AT4G38640 1.0kb downstream 1.0kb downstream 1000 false Chr4: 18058653-18059652 Arabidopsis thaliana
AT4G38640 2.0kb upstream 2.0kb upstream 4637 true Chr4: 18059653-18064289 Arabidopsis thaliana
AT4G38640 2.0kb upstream 2.0kb upstream 2000 false Chr4: 18062290-18064289 Arabidopsis thaliana
AT4G38640 2.0kb downstream 2.0kb downstream 4637 true Chr4: 18057653-18062289 Arabidopsis thaliana
AT4G38640 2.0kb downstream 2.0kb downstream 2000 false Chr4: 18057653-18059652 Arabidopsis thaliana
AT4G38640 5.0kb upstream 5.0kb upstream 7637 true Chr4: 18059653-18067289 Arabidopsis thaliana
AT4G38640 5.0kb upstream 5.0kb upstream 5000 false Chr4: 18062290-18067289 Arabidopsis thaliana
AT4G38640 5.0kb downstream 5.0kb downstream 7637 true Chr4: 18054653-18062289 Arabidopsis thaliana
AT4G38640 5.0kb downstream 5.0kb downstream 5000 false Chr4: 18054653-18059652 Arabidopsis thaliana
AT4G38640 10.0kb upstream 10.0kb upstream 12637 true Chr4: 18059653-18072289 Arabidopsis thaliana
AT4G38640 10.0kb upstream 10.0kb upstream 10000 false Chr4: 18062290-18072289 Arabidopsis thaliana
AT4G38640 10.0kb downstream 10.0kb downstream 12637 true Chr4: 18049653-18062289 Arabidopsis thaliana
AT4G38640 10.0kb downstream 10.0kb downstream 10000 false Chr4: 18049653-18059652 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375180 5261 Brassicaceae View MSA
123833858 5264 Brassicales-Malvales View MSA
124345026 5266 SBM View MSA
124236844 5268 Malvidae View MSA
124063847 5270 Rosid View MSA
123737171 5271 Pentapetalae View MSA
122792256 5272 Eudicot View MSA
122043593 5273 Angiosperm View MSA
121347298 5274 Embryophyte View MSA
123428325 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.359        
cufflinks 15.658        
cufflinks 10.981        
cufflinks 15.612        
cufflinks 10.902        
cufflinks 16.139       High

0 Strain