Gene : AT4G38260 A. thaliana TAIR10
Defline:  (1 of 4) PTHR17985//PTHR17985:SF13 - SER/THR-RICH PROTEIN T10 IN DGCR REGION // SUBFAMILY NOT NAMED Genomic Order:  3932
Name:  ? AT4G38260 Secondary Identifier:  ? PAC:19644653
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G38260 0.5kb upstream 0.5kb upstream 2308 true Chr4: 17936921-17939228 Arabidopsis thaliana
AT4G38260 0.5kb upstream 0.5kb upstream 500 false Chr4: 17938729-17939228 Arabidopsis thaliana
AT4G38260 0.5kb downstream 0.5kb downstream 2308 true Chr4: 17936421-17938728 Arabidopsis thaliana
AT4G38260 0.5kb downstream 0.5kb downstream 500 false Chr4: 17936421-17936920 Arabidopsis thaliana
AT4G38260 1.0kb upstream 1.0kb upstream 2808 true Chr4: 17936921-17939728 Arabidopsis thaliana
AT4G38260 1.0kb upstream 1.0kb upstream 1000 false Chr4: 17938729-17939728 Arabidopsis thaliana
AT4G38260 1.0kb downstream 1.0kb downstream 2808 true Chr4: 17935921-17938728 Arabidopsis thaliana
AT4G38260 1.0kb downstream 1.0kb downstream 1000 false Chr4: 17935921-17936920 Arabidopsis thaliana
AT4G38260 2.0kb upstream 2.0kb upstream 3808 true Chr4: 17936921-17940728 Arabidopsis thaliana
AT4G38260 2.0kb upstream 2.0kb upstream 2000 false Chr4: 17938729-17940728 Arabidopsis thaliana
AT4G38260 2.0kb downstream 2.0kb downstream 3808 true Chr4: 17934921-17938728 Arabidopsis thaliana
AT4G38260 2.0kb downstream 2.0kb downstream 2000 false Chr4: 17934921-17936920 Arabidopsis thaliana
AT4G38260 5.0kb upstream 5.0kb upstream 6808 true Chr4: 17936921-17943728 Arabidopsis thaliana
AT4G38260 5.0kb upstream 5.0kb upstream 5000 false Chr4: 17938729-17943728 Arabidopsis thaliana
AT4G38260 5.0kb downstream 5.0kb downstream 6808 true Chr4: 17931921-17938728 Arabidopsis thaliana
AT4G38260 5.0kb downstream 5.0kb downstream 5000 false Chr4: 17931921-17936920 Arabidopsis thaliana
AT4G38260 10.0kb upstream 10.0kb upstream 11808 true Chr4: 17936921-17948728 Arabidopsis thaliana
AT4G38260 10.0kb upstream 10.0kb upstream 10000 false Chr4: 17938729-17948728 Arabidopsis thaliana
AT4G38260 10.0kb downstream 10.0kb downstream 11808 true Chr4: 17926921-17938728 Arabidopsis thaliana
AT4G38260 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17926921-17936920 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364431 5261 Brassicaceae View MSA
123836292 5264 Brassicales-Malvales View MSA
124347731 5266 SBM View MSA
124236992 5268 Malvidae View MSA
124064404 5270 Rosid View MSA
123753497 5271 Pentapetalae View MSA
122790502 5272 Eudicot View MSA
122045802 5273 Angiosperm View MSA
121346368 5274 Embryophyte View MSA
123428335 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.9        
cufflinks 11.924        
cufflinks 8.91       Low
cufflinks 11.899        
cufflinks 13.405       High
cufflinks 9.12       Low

0 Strain