Gene : AT4G38090 A. thaliana TAIR10
Defline:  (1 of 1) PTHR16301 - IMPACT-RELATED Genomic Order:  3914
Name:  ? AT4G38090 Secondary Identifier:  ? PAC:19644510
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G38090 0.5kb upstream 0.5kb upstream 1705 true Chr4: 17883617-17885321 Arabidopsis thaliana
AT4G38090 0.5kb upstream 0.5kb upstream 500 false Chr4: 17884822-17885321 Arabidopsis thaliana
AT4G38090 0.5kb downstream 0.5kb downstream 1705 true Chr4: 17883117-17884821 Arabidopsis thaliana
AT4G38090 0.5kb downstream 0.5kb downstream 500 false Chr4: 17883117-17883616 Arabidopsis thaliana
AT4G38090 1.0kb upstream 1.0kb upstream 2205 true Chr4: 17883617-17885821 Arabidopsis thaliana
AT4G38090 1.0kb upstream 1.0kb upstream 1000 false Chr4: 17884822-17885821 Arabidopsis thaliana
AT4G38090 1.0kb downstream 1.0kb downstream 2205 true Chr4: 17882617-17884821 Arabidopsis thaliana
AT4G38090 1.0kb downstream 1.0kb downstream 1000 false Chr4: 17882617-17883616 Arabidopsis thaliana
AT4G38090 2.0kb upstream 2.0kb upstream 3205 true Chr4: 17883617-17886821 Arabidopsis thaliana
AT4G38090 2.0kb upstream 2.0kb upstream 2000 false Chr4: 17884822-17886821 Arabidopsis thaliana
AT4G38090 2.0kb downstream 2.0kb downstream 3205 true Chr4: 17881617-17884821 Arabidopsis thaliana
AT4G38090 2.0kb downstream 2.0kb downstream 2000 false Chr4: 17881617-17883616 Arabidopsis thaliana
AT4G38090 5.0kb upstream 5.0kb upstream 6205 true Chr4: 17883617-17889821 Arabidopsis thaliana
AT4G38090 5.0kb upstream 5.0kb upstream 5000 false Chr4: 17884822-17889821 Arabidopsis thaliana
AT4G38090 5.0kb downstream 5.0kb downstream 6205 true Chr4: 17878617-17884821 Arabidopsis thaliana
AT4G38090 5.0kb downstream 5.0kb downstream 5000 false Chr4: 17878617-17883616 Arabidopsis thaliana
AT4G38090 10.0kb upstream 10.0kb upstream 11205 true Chr4: 17883617-17894821 Arabidopsis thaliana
AT4G38090 10.0kb upstream 10.0kb upstream 10000 false Chr4: 17884822-17894821 Arabidopsis thaliana
AT4G38090 10.0kb downstream 10.0kb downstream 11205 true Chr4: 17873617-17884821 Arabidopsis thaliana
AT4G38090 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17873617-17883616 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368167 5261 Brassicaceae View MSA
123827548 5264 Brassicales-Malvales View MSA
124338261 5266 SBM View MSA
124240109 5268 Malvidae View MSA
124061483 5270 Rosid View MSA
123739844 5271 Pentapetalae View MSA
122787170 5272 Eudicot View MSA
122046468 5273 Angiosperm View MSA
121347783 5274 Embryophyte View MSA
123425270 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.892        
cufflinks 5.04       High
cufflinks 4.315        
cufflinks 4.775        
cufflinks 4.78        
cufflinks 4.163       Low

0 Strain