Gene : AT4G38040 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11062//PTHR11062:SF63 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // EXOSTOSIN FAMILY PROTEIN Genomic Order:  3908
Name:  ? AT4G38040 Secondary Identifier:  ? PAC:19648118
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5980 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G38040 0.5kb upstream 0.5kb upstream 2365 true Chr4: 17866938-17869302 Arabidopsis thaliana
AT4G38040 0.5kb upstream 0.5kb upstream 500 false Chr4: 17866938-17867437 Arabidopsis thaliana
AT4G38040 0.5kb downstream 0.5kb downstream 2365 true Chr4: 17867438-17869802 Arabidopsis thaliana
AT4G38040 0.5kb downstream 0.5kb downstream 500 false Chr4: 17869303-17869802 Arabidopsis thaliana
AT4G38040 1.0kb upstream 1.0kb upstream 2865 true Chr4: 17866438-17869302 Arabidopsis thaliana
AT4G38040 1.0kb upstream 1.0kb upstream 1000 false Chr4: 17866438-17867437 Arabidopsis thaliana
AT4G38040 1.0kb downstream 1.0kb downstream 2865 true Chr4: 17867438-17870302 Arabidopsis thaliana
AT4G38040 1.0kb downstream 1.0kb downstream 1000 false Chr4: 17869303-17870302 Arabidopsis thaliana
AT4G38040 2.0kb upstream 2.0kb upstream 3865 true Chr4: 17865438-17869302 Arabidopsis thaliana
AT4G38040 2.0kb upstream 2.0kb upstream 2000 false Chr4: 17865438-17867437 Arabidopsis thaliana
AT4G38040 2.0kb downstream 2.0kb downstream 3865 true Chr4: 17867438-17871302 Arabidopsis thaliana
AT4G38040 2.0kb downstream 2.0kb downstream 2000 false Chr4: 17869303-17871302 Arabidopsis thaliana
AT4G38040 5.0kb upstream 5.0kb upstream 6865 true Chr4: 17862438-17869302 Arabidopsis thaliana
AT4G38040 5.0kb upstream 5.0kb upstream 5000 false Chr4: 17862438-17867437 Arabidopsis thaliana
AT4G38040 5.0kb downstream 5.0kb downstream 6865 true Chr4: 17867438-17874302 Arabidopsis thaliana
AT4G38040 5.0kb downstream 5.0kb downstream 5000 false Chr4: 17869303-17874302 Arabidopsis thaliana
AT4G38040 10.0kb upstream 10.0kb upstream 11865 true Chr4: 17857438-17869302 Arabidopsis thaliana
AT4G38040 10.0kb upstream 10.0kb upstream 10000 false Chr4: 17857438-17867437 Arabidopsis thaliana
AT4G38040 10.0kb downstream 10.0kb downstream 11865 true Chr4: 17867438-17879302 Arabidopsis thaliana
AT4G38040 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17869303-17879302 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369727 5261 Brassicaceae View MSA
123834330 5264 Brassicales-Malvales View MSA
124350181 5266 SBM View MSA
124254213 5268 Malvidae View MSA
124072198 5270 Rosid View MSA
123751032 5271 Pentapetalae View MSA
122797278 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.495        
cufflinks 17.285        
cufflinks 13.451        
cufflinks 17.909        
cufflinks 12.704       Low
cufflinks 18.473       High

0 Strain