Gene : SQE3 A. thaliana TAIR10
Primary Identifier:  ? AT4G37760 Defline:  (1 of 6) K00511 - squalene monooxygenase (SQLE, ERG1)
Genomic Order:  3880 Name:  ? AT4G37760
Secondary Identifier:  ? PAC:19644014
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-2541 Arabidopsis thaliana pathologic  
Athaliana PWY-5670 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G37760 0.5kb upstream 0.5kb upstream 3292 true Chr4: 17743387-17746678 Arabidopsis thaliana
AT4G37760 0.5kb upstream 0.5kb upstream 500 false Chr4: 17743387-17743886 Arabidopsis thaliana
AT4G37760 0.5kb downstream 0.5kb downstream 3292 true Chr4: 17743887-17747178 Arabidopsis thaliana
AT4G37760 0.5kb downstream 0.5kb downstream 500 false Chr4: 17746679-17747178 Arabidopsis thaliana
AT4G37760 1.0kb upstream 1.0kb upstream 3792 true Chr4: 17742887-17746678 Arabidopsis thaliana
AT4G37760 1.0kb upstream 1.0kb upstream 1000 false Chr4: 17742887-17743886 Arabidopsis thaliana
AT4G37760 1.0kb downstream 1.0kb downstream 3792 true Chr4: 17743887-17747678 Arabidopsis thaliana
AT4G37760 1.0kb downstream 1.0kb downstream 1000 false Chr4: 17746679-17747678 Arabidopsis thaliana
AT4G37760 2.0kb upstream 2.0kb upstream 4792 true Chr4: 17741887-17746678 Arabidopsis thaliana
AT4G37760 2.0kb upstream 2.0kb upstream 2000 false Chr4: 17741887-17743886 Arabidopsis thaliana
AT4G37760 2.0kb downstream 2.0kb downstream 4792 true Chr4: 17743887-17748678 Arabidopsis thaliana
AT4G37760 2.0kb downstream 2.0kb downstream 2000 false Chr4: 17746679-17748678 Arabidopsis thaliana
AT4G37760 5.0kb upstream 5.0kb upstream 7792 true Chr4: 17738887-17746678 Arabidopsis thaliana
AT4G37760 5.0kb upstream 5.0kb upstream 5000 false Chr4: 17738887-17743886 Arabidopsis thaliana
AT4G37760 5.0kb downstream 5.0kb downstream 7792 true Chr4: 17743887-17751678 Arabidopsis thaliana
AT4G37760 5.0kb downstream 5.0kb downstream 5000 false Chr4: 17746679-17751678 Arabidopsis thaliana
AT4G37760 10.0kb upstream 10.0kb upstream 12792 true Chr4: 17733887-17746678 Arabidopsis thaliana
AT4G37760 10.0kb upstream 10.0kb upstream 10000 false Chr4: 17733887-17743886 Arabidopsis thaliana
AT4G37760 10.0kb downstream 10.0kb downstream 12792 true Chr4: 17743887-17756678 Arabidopsis thaliana
AT4G37760 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17746679-17756678 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380334 5261 Brassicaceae View MSA
123838211 5264 Brassicales-Malvales View MSA
124342457 5266 SBM View MSA
124254451 5268 Malvidae View MSA
124072398 5270 Rosid View MSA
123747368 5271 Pentapetalae View MSA
122788930 5272 Eudicot View MSA
122042003 5273 Angiosperm View MSA
121344187 5274 Embryophyte View MSA
123428498 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.939        
cufflinks 0.658        
cufflinks 10.107        
cufflinks 0.574        
cufflinks 13.099       High
cufflinks 0.547        

0 Strain