Gene : AT4G39520 A. thaliana TAIR10
Defline:  (1 of 3) K06944 - uncharacterized protein (K06944) Genomic Order:  4057
Name:  ? AT4G39520 Secondary Identifier:  ? PAC:19646909
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G39520 0.5kb upstream 0.5kb upstream 3737 true Chr4: 18370968-18374704 Arabidopsis thaliana
AT4G39520 0.5kb upstream 0.5kb upstream 500 false Chr4: 18374205-18374704 Arabidopsis thaliana
AT4G39520 0.5kb downstream 0.5kb downstream 3737 true Chr4: 18370468-18374204 Arabidopsis thaliana
AT4G39520 0.5kb downstream 0.5kb downstream 500 false Chr4: 18370468-18370967 Arabidopsis thaliana
AT4G39520 1.0kb upstream 1.0kb upstream 4237 true Chr4: 18370968-18375204 Arabidopsis thaliana
AT4G39520 1.0kb upstream 1.0kb upstream 1000 false Chr4: 18374205-18375204 Arabidopsis thaliana
AT4G39520 1.0kb downstream 1.0kb downstream 4237 true Chr4: 18369968-18374204 Arabidopsis thaliana
AT4G39520 1.0kb downstream 1.0kb downstream 1000 false Chr4: 18369968-18370967 Arabidopsis thaliana
AT4G39520 2.0kb upstream 2.0kb upstream 5237 true Chr4: 18370968-18376204 Arabidopsis thaliana
AT4G39520 2.0kb upstream 2.0kb upstream 2000 false Chr4: 18374205-18376204 Arabidopsis thaliana
AT4G39520 2.0kb downstream 2.0kb downstream 5237 true Chr4: 18368968-18374204 Arabidopsis thaliana
AT4G39520 2.0kb downstream 2.0kb downstream 2000 false Chr4: 18368968-18370967 Arabidopsis thaliana
AT4G39520 5.0kb upstream 5.0kb upstream 8237 true Chr4: 18370968-18379204 Arabidopsis thaliana
AT4G39520 5.0kb upstream 5.0kb upstream 5000 false Chr4: 18374205-18379204 Arabidopsis thaliana
AT4G39520 5.0kb downstream 5.0kb downstream 8237 true Chr4: 18365968-18374204 Arabidopsis thaliana
AT4G39520 5.0kb downstream 5.0kb downstream 5000 false Chr4: 18365968-18370967 Arabidopsis thaliana
AT4G39520 10.0kb upstream 10.0kb upstream 13237 true Chr4: 18370968-18384204 Arabidopsis thaliana
AT4G39520 10.0kb upstream 10.0kb upstream 10000 false Chr4: 18374205-18384204 Arabidopsis thaliana
AT4G39520 10.0kb downstream 10.0kb downstream 13237 true Chr4: 18360968-18374204 Arabidopsis thaliana
AT4G39520 10.0kb downstream 10.0kb downstream 10000 false Chr4: 18360968-18370967 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372314 5261 Brassicaceae View MSA
123831224 5264 Brassicales-Malvales View MSA
124337634 5266 SBM View MSA
124237429 5268 Malvidae View MSA
124060713 5270 Rosid View MSA
123738243 5271 Pentapetalae View MSA
122789740 5272 Eudicot View MSA
122042867 5273 Angiosperm View MSA
121351223 5274 Embryophyte View MSA
123424708 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.231        
cufflinks 24.846        
cufflinks 17.847       Low
cufflinks 25.855        
cufflinks 18.413       Low
cufflinks 25.51        

0 Strain