Gene : KDTA A. thaliana TAIR10
Primary Identifier:  ? AT5G03770 Defline:  (1 of 1) 2.4.99.12 - Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase / Lipid IV(A) KDO transferase
Genomic Order:  295 Name:  ? AT5G03770
Secondary Identifier:  ? PAC:19669334
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana KDOSYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G03770 0.5kb upstream 0.5kb upstream 3189 true Chr5: 994660-997848 Arabidopsis thaliana
AT5G03770 0.5kb upstream 0.5kb upstream 500 false Chr5: 994660-995159 Arabidopsis thaliana
AT5G03770 0.5kb downstream 0.5kb downstream 3189 true Chr5: 995160-998348 Arabidopsis thaliana
AT5G03770 0.5kb downstream 0.5kb downstream 500 false Chr5: 997849-998348 Arabidopsis thaliana
AT5G03770 1.0kb upstream 1.0kb upstream 3689 true Chr5: 994160-997848 Arabidopsis thaliana
AT5G03770 1.0kb upstream 1.0kb upstream 1000 false Chr5: 994160-995159 Arabidopsis thaliana
AT5G03770 1.0kb downstream 1.0kb downstream 3689 true Chr5: 995160-998848 Arabidopsis thaliana
AT5G03770 1.0kb downstream 1.0kb downstream 1000 false Chr5: 997849-998848 Arabidopsis thaliana
AT5G03770 2.0kb upstream 2.0kb upstream 4689 true Chr5: 993160-997848 Arabidopsis thaliana
AT5G03770 2.0kb upstream 2.0kb upstream 2000 false Chr5: 993160-995159 Arabidopsis thaliana
AT5G03770 2.0kb downstream 2.0kb downstream 4689 true Chr5: 995160-999848 Arabidopsis thaliana
AT5G03770 2.0kb downstream 2.0kb downstream 2000 false Chr5: 997849-999848 Arabidopsis thaliana
AT5G03770 5.0kb upstream 5.0kb upstream 7689 true Chr5: 990160-997848 Arabidopsis thaliana
AT5G03770 5.0kb upstream 5.0kb upstream 5000 false Chr5: 990160-995159 Arabidopsis thaliana
AT5G03770 5.0kb downstream 5.0kb downstream 7689 true Chr5: 995160-1002848 Arabidopsis thaliana
AT5G03770 5.0kb downstream 5.0kb downstream 5000 false Chr5: 997849-1002848 Arabidopsis thaliana
AT5G03770 10.0kb upstream 10.0kb upstream 12689 true Chr5: 985160-997848 Arabidopsis thaliana
AT5G03770 10.0kb upstream 10.0kb upstream 10000 false Chr5: 985160-995159 Arabidopsis thaliana
AT5G03770 10.0kb downstream 10.0kb downstream 12689 true Chr5: 995160-1007848 Arabidopsis thaliana
AT5G03770 10.0kb downstream 10.0kb downstream 10000 false Chr5: 997849-1007848 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371512 5261 Brassicaceae View MSA
123828711 5264 Brassicales-Malvales View MSA
124321549 5266 SBM View MSA
124242327 5268 Malvidae View MSA
124064068 5270 Rosid View MSA
123737995 5271 Pentapetalae View MSA
122793703 5272 Eudicot View MSA
122042607 5273 Angiosperm View MSA
121344444 5274 Embryophyte View MSA
123380045 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.234       Low
cufflinks 3.391       High
cufflinks 1.503        
cufflinks 3.525       High
cufflinks 1.64        
cufflinks 2.395        

0 Strain