Gene : AT5G03820 A. thaliana TAIR10
Defline:  (1 of 3) PTHR22835//PTHR22835:SF146 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  301
Name:  ? AT5G03820 Secondary Identifier:  ? PAC:19672560
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana LIPAS-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G03820 0.5kb upstream 0.5kb upstream 1961 true Chr5: 1015803-1017763 Arabidopsis thaliana
AT5G03820 0.5kb upstream 0.5kb upstream 500 false Chr5: 1017264-1017763 Arabidopsis thaliana
AT5G03820 0.5kb downstream 0.5kb downstream 1961 true Chr5: 1015303-1017263 Arabidopsis thaliana
AT5G03820 0.5kb downstream 0.5kb downstream 500 false Chr5: 1015303-1015802 Arabidopsis thaliana
AT5G03820 1.0kb upstream 1.0kb upstream 2461 true Chr5: 1015803-1018263 Arabidopsis thaliana
AT5G03820 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1017264-1018263 Arabidopsis thaliana
AT5G03820 1.0kb downstream 1.0kb downstream 2461 true Chr5: 1014803-1017263 Arabidopsis thaliana
AT5G03820 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1014803-1015802 Arabidopsis thaliana
AT5G03820 2.0kb upstream 2.0kb upstream 3461 true Chr5: 1015803-1019263 Arabidopsis thaliana
AT5G03820 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1017264-1019263 Arabidopsis thaliana
AT5G03820 2.0kb downstream 2.0kb downstream 3461 true Chr5: 1013803-1017263 Arabidopsis thaliana
AT5G03820 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1013803-1015802 Arabidopsis thaliana
AT5G03820 5.0kb upstream 5.0kb upstream 6461 true Chr5: 1015803-1022263 Arabidopsis thaliana
AT5G03820 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1017264-1022263 Arabidopsis thaliana
AT5G03820 5.0kb downstream 5.0kb downstream 6461 true Chr5: 1010803-1017263 Arabidopsis thaliana
AT5G03820 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1010803-1015802 Arabidopsis thaliana
AT5G03820 10.0kb upstream 10.0kb upstream 11461 true Chr5: 1015803-1027263 Arabidopsis thaliana
AT5G03820 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1017264-1027263 Arabidopsis thaliana
AT5G03820 10.0kb downstream 10.0kb downstream 11461 true Chr5: 1005803-1017263 Arabidopsis thaliana
AT5G03820 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1005803-1015802 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360339 5261 Brassicaceae View MSA
123840328 5264 Brassicales-Malvales View MSA
124337101 5266 SBM View MSA
124247854 5268 Malvidae View MSA
124074404 5270 Rosid View MSA
123753785 5271 Pentapetalae View MSA
122797352 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.078     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain