Gene : UBQ3 A. thaliana TAIR10
Primary Identifier:  ? AT5G03240 Defline:  (1 of 3) K04551//K08770 - ubiquitin B (UBB) // ubiquitin C (UBC)
Genomic Order:  235 Name:  ? AT5G03240
Secondary Identifier:  ? PAC:19666607
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G03240 0.5kb upstream 0.5kb upstream 2291 true Chr5: 771725-774015 Arabidopsis thaliana
AT5G03240 0.5kb upstream 0.5kb upstream 500 false Chr5: 773516-774015 Arabidopsis thaliana
AT5G03240 0.5kb downstream 0.5kb downstream 2291 true Chr5: 771225-773515 Arabidopsis thaliana
AT5G03240 0.5kb downstream 0.5kb downstream 500 false Chr5: 771225-771724 Arabidopsis thaliana
AT5G03240 1.0kb upstream 1.0kb upstream 2791 true Chr5: 771725-774515 Arabidopsis thaliana
AT5G03240 1.0kb upstream 1.0kb upstream 1000 false Chr5: 773516-774515 Arabidopsis thaliana
AT5G03240 1.0kb downstream 1.0kb downstream 2791 true Chr5: 770725-773515 Arabidopsis thaliana
AT5G03240 1.0kb downstream 1.0kb downstream 1000 false Chr5: 770725-771724 Arabidopsis thaliana
AT5G03240 2.0kb upstream 2.0kb upstream 3791 true Chr5: 771725-775515 Arabidopsis thaliana
AT5G03240 2.0kb upstream 2.0kb upstream 2000 false Chr5: 773516-775515 Arabidopsis thaliana
AT5G03240 2.0kb downstream 2.0kb downstream 3791 true Chr5: 769725-773515 Arabidopsis thaliana
AT5G03240 2.0kb downstream 2.0kb downstream 2000 false Chr5: 769725-771724 Arabidopsis thaliana
AT5G03240 5.0kb upstream 5.0kb upstream 6791 true Chr5: 771725-778515 Arabidopsis thaliana
AT5G03240 5.0kb upstream 5.0kb upstream 5000 false Chr5: 773516-778515 Arabidopsis thaliana
AT5G03240 5.0kb downstream 5.0kb downstream 6791 true Chr5: 766725-773515 Arabidopsis thaliana
AT5G03240 5.0kb downstream 5.0kb downstream 5000 false Chr5: 766725-771724 Arabidopsis thaliana
AT5G03240 10.0kb upstream 10.0kb upstream 11791 true Chr5: 771725-783515 Arabidopsis thaliana
AT5G03240 10.0kb upstream 10.0kb upstream 10000 false Chr5: 773516-783515 Arabidopsis thaliana
AT5G03240 10.0kb downstream 10.0kb downstream 11791 true Chr5: 761725-773515 Arabidopsis thaliana
AT5G03240 10.0kb downstream 10.0kb downstream 10000 false Chr5: 761725-771724 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029747 5273 Angiosperm View MSA
124071531 5270 Rosid View MSA
122330976 5261 Brassicaceae Singleton cluster - no MSA
123772190 5264 Brassicales-Malvales Singleton cluster - no MSA
124346891 5266 SBM View MSA
124180926 5268 Malvidae View MSA
123752540 5271 Pentapetalae View MSA
122796500 5272 Eudicot View MSA
121351277 5274 Embryophyte View MSA
123428084 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 137.765     High  
cufflinks 136.83     High  
cufflinks 221.92     High High
cufflinks 145.401     High  
cufflinks 206.918     High High
cufflinks 98.774     High Low

0 Strain