Gene : AT5G03250 A. thaliana TAIR10
Defline:  (1 of 24) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  236
Name:  ? AT5G03250 Secondary Identifier:  ? PAC:19666388
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G03250 0.5kb upstream 0.5kb upstream 3148 true Chr5: 773901-777048 Arabidopsis thaliana
AT5G03250 0.5kb upstream 0.5kb upstream 500 false Chr5: 773901-774400 Arabidopsis thaliana
AT5G03250 0.5kb downstream 0.5kb downstream 3148 true Chr5: 774401-777548 Arabidopsis thaliana
AT5G03250 0.5kb downstream 0.5kb downstream 500 false Chr5: 777049-777548 Arabidopsis thaliana
AT5G03250 1.0kb upstream 1.0kb upstream 3648 true Chr5: 773401-777048 Arabidopsis thaliana
AT5G03250 1.0kb upstream 1.0kb upstream 1000 false Chr5: 773401-774400 Arabidopsis thaliana
AT5G03250 1.0kb downstream 1.0kb downstream 3648 true Chr5: 774401-778048 Arabidopsis thaliana
AT5G03250 1.0kb downstream 1.0kb downstream 1000 false Chr5: 777049-778048 Arabidopsis thaliana
AT5G03250 2.0kb upstream 2.0kb upstream 4648 true Chr5: 772401-777048 Arabidopsis thaliana
AT5G03250 2.0kb upstream 2.0kb upstream 2000 false Chr5: 772401-774400 Arabidopsis thaliana
AT5G03250 2.0kb downstream 2.0kb downstream 4648 true Chr5: 774401-779048 Arabidopsis thaliana
AT5G03250 2.0kb downstream 2.0kb downstream 2000 false Chr5: 777049-779048 Arabidopsis thaliana
AT5G03250 5.0kb upstream 5.0kb upstream 7648 true Chr5: 769401-777048 Arabidopsis thaliana
AT5G03250 5.0kb upstream 5.0kb upstream 5000 false Chr5: 769401-774400 Arabidopsis thaliana
AT5G03250 5.0kb downstream 5.0kb downstream 7648 true Chr5: 774401-782048 Arabidopsis thaliana
AT5G03250 5.0kb downstream 5.0kb downstream 5000 false Chr5: 777049-782048 Arabidopsis thaliana
AT5G03250 10.0kb upstream 10.0kb upstream 12648 true Chr5: 764401-777048 Arabidopsis thaliana
AT5G03250 10.0kb upstream 10.0kb upstream 10000 false Chr5: 764401-774400 Arabidopsis thaliana
AT5G03250 10.0kb downstream 10.0kb downstream 12648 true Chr5: 774401-787048 Arabidopsis thaliana
AT5G03250 10.0kb downstream 10.0kb downstream 10000 false Chr5: 777049-787048 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364940 5261 Brassicaceae View MSA
123837568 5264 Brassicales-Malvales View MSA
124345947 5266 SBM View MSA
124250898 5268 Malvidae View MSA
124071972 5270 Rosid View MSA
123743168 5271 Pentapetalae View MSA
122791271 5272 Eudicot View MSA
122050644 5273 Angiosperm View MSA
121312043 5274 Embryophyte View MSA
123349254 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.722        
cufflinks 1.251        
cufflinks 0.608        
cufflinks 1.167        
cufflinks 0.56       Low
cufflinks 1.352       High

0 Strain