Gene : IDH-V A. thaliana TAIR10
Primary Identifier:  ? AT5G03290 Defline:  (1 of 6) 1.1.1.41 - Isocitrate dehydrogenase (NAD(+)) / Nicotinamide adenine dinucleotide isocitrate dehydrogenase
Genomic Order:  240 Name:  ? AT5G03290
Secondary Identifier:  ? PAC:19669239
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5464 Arabidopsis thaliana pathologic  
Athaliana PWY-5690 Arabidopsis thaliana pathologic  
Athaliana PWY-6549 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G03290 0.5kb upstream 0.5kb upstream 2709 true Chr5: 793474-796182 Arabidopsis thaliana
AT5G03290 0.5kb upstream 0.5kb upstream 500 false Chr5: 793474-793973 Arabidopsis thaliana
AT5G03290 0.5kb downstream 0.5kb downstream 2709 true Chr5: 793974-796682 Arabidopsis thaliana
AT5G03290 0.5kb downstream 0.5kb downstream 500 false Chr5: 796183-796682 Arabidopsis thaliana
AT5G03290 1.0kb upstream 1.0kb upstream 3209 true Chr5: 792974-796182 Arabidopsis thaliana
AT5G03290 1.0kb upstream 1.0kb upstream 1000 false Chr5: 792974-793973 Arabidopsis thaliana
AT5G03290 1.0kb downstream 1.0kb downstream 3209 true Chr5: 793974-797182 Arabidopsis thaliana
AT5G03290 1.0kb downstream 1.0kb downstream 1000 false Chr5: 796183-797182 Arabidopsis thaliana
AT5G03290 2.0kb upstream 2.0kb upstream 4209 true Chr5: 791974-796182 Arabidopsis thaliana
AT5G03290 2.0kb upstream 2.0kb upstream 2000 false Chr5: 791974-793973 Arabidopsis thaliana
AT5G03290 2.0kb downstream 2.0kb downstream 4209 true Chr5: 793974-798182 Arabidopsis thaliana
AT5G03290 2.0kb downstream 2.0kb downstream 2000 false Chr5: 796183-798182 Arabidopsis thaliana
AT5G03290 5.0kb upstream 5.0kb upstream 7209 true Chr5: 788974-796182 Arabidopsis thaliana
AT5G03290 5.0kb upstream 5.0kb upstream 5000 false Chr5: 788974-793973 Arabidopsis thaliana
AT5G03290 5.0kb downstream 5.0kb downstream 7209 true Chr5: 793974-801182 Arabidopsis thaliana
AT5G03290 5.0kb downstream 5.0kb downstream 5000 false Chr5: 796183-801182 Arabidopsis thaliana
AT5G03290 10.0kb upstream 10.0kb upstream 12209 true Chr5: 783974-796182 Arabidopsis thaliana
AT5G03290 10.0kb upstream 10.0kb upstream 10000 false Chr5: 783974-793973 Arabidopsis thaliana
AT5G03290 10.0kb downstream 10.0kb downstream 12209 true Chr5: 793974-806182 Arabidopsis thaliana
AT5G03290 10.0kb downstream 10.0kb downstream 10000 false Chr5: 796183-806182 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367648 5261 Brassicaceae View MSA
123834556 5264 Brassicales-Malvales View MSA
124340009 5266 SBM View MSA
124251295 5268 Malvidae View MSA
124066571 5270 Rosid View MSA
123739712 5271 Pentapetalae View MSA
122792664 5272 Eudicot View MSA
122041698 5273 Angiosperm View MSA
121349734 5274 Embryophyte View MSA
123425496 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.742     High  
cufflinks 45.709     High  
cufflinks 38.783     High Low
cufflinks 46.972     High  
cufflinks 40.373     High  
cufflinks 55.086     High High

0 Strain