Gene : AT5G02850 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13208:SF2 - MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 4 Genomic Order:  195
Name:  ? AT5G02850 Secondary Identifier:  ? PAC:19671096
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G02850 0.5kb upstream 0.5kb upstream 2064 true Chr5: 651610-653673 Arabidopsis thaliana
AT5G02850 0.5kb upstream 0.5kb upstream 500 false Chr5: 651610-652109 Arabidopsis thaliana
AT5G02850 0.5kb downstream 0.5kb downstream 2064 true Chr5: 652110-654173 Arabidopsis thaliana
AT5G02850 0.5kb downstream 0.5kb downstream 500 false Chr5: 653674-654173 Arabidopsis thaliana
AT5G02850 1.0kb upstream 1.0kb upstream 2564 true Chr5: 651110-653673 Arabidopsis thaliana
AT5G02850 1.0kb upstream 1.0kb upstream 1000 false Chr5: 651110-652109 Arabidopsis thaliana
AT5G02850 1.0kb downstream 1.0kb downstream 2564 true Chr5: 652110-654673 Arabidopsis thaliana
AT5G02850 1.0kb downstream 1.0kb downstream 1000 false Chr5: 653674-654673 Arabidopsis thaliana
AT5G02850 2.0kb upstream 2.0kb upstream 3564 true Chr5: 650110-653673 Arabidopsis thaliana
AT5G02850 2.0kb upstream 2.0kb upstream 2000 false Chr5: 650110-652109 Arabidopsis thaliana
AT5G02850 2.0kb downstream 2.0kb downstream 3564 true Chr5: 652110-655673 Arabidopsis thaliana
AT5G02850 2.0kb downstream 2.0kb downstream 2000 false Chr5: 653674-655673 Arabidopsis thaliana
AT5G02850 5.0kb upstream 5.0kb upstream 6564 true Chr5: 647110-653673 Arabidopsis thaliana
AT5G02850 5.0kb upstream 5.0kb upstream 5000 false Chr5: 647110-652109 Arabidopsis thaliana
AT5G02850 5.0kb downstream 5.0kb downstream 6564 true Chr5: 652110-658673 Arabidopsis thaliana
AT5G02850 5.0kb downstream 5.0kb downstream 5000 false Chr5: 653674-658673 Arabidopsis thaliana
AT5G02850 10.0kb upstream 10.0kb upstream 11564 true Chr5: 642110-653673 Arabidopsis thaliana
AT5G02850 10.0kb upstream 10.0kb upstream 10000 false Chr5: 642110-652109 Arabidopsis thaliana
AT5G02850 10.0kb downstream 10.0kb downstream 11564 true Chr5: 652110-663673 Arabidopsis thaliana
AT5G02850 10.0kb downstream 10.0kb downstream 10000 false Chr5: 653674-663673 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366470 5261 Brassicaceae View MSA
123835831 5264 Brassicales-Malvales View MSA
124339475 5266 SBM View MSA
124243526 5268 Malvidae View MSA
124063104 5270 Rosid View MSA
123737443 5271 Pentapetalae View MSA
122786979 5272 Eudicot View MSA
122042269 5273 Angiosperm View MSA
121345208 5274 Embryophyte View MSA
123380175 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.145        
cufflinks 9.063        
cufflinks 6.545       Low
cufflinks 11.375       High
cufflinks 9.066        
cufflinks 11.591       High

0 Strain