Gene : PLL2 A. thaliana TAIR10
Primary Identifier:  ? AT5G02400 Defline:  (1 of 3) PTHR13832//PTHR13832:SF228 - PROTEIN PHOSPHATASE 2C // PROTEIN PHOSPHATASE 2C 36-RELATED
Genomic Order:  148 Name:  ? AT5G02400
Secondary Identifier:  ? PAC:19667262
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G02400 0.5kb upstream 0.5kb upstream 2836 true Chr5: 513061-515896 Arabidopsis thaliana
AT5G02400 0.5kb upstream 0.5kb upstream 500 false Chr5: 513061-513560 Arabidopsis thaliana
AT5G02400 0.5kb downstream 0.5kb downstream 2836 true Chr5: 513561-516396 Arabidopsis thaliana
AT5G02400 0.5kb downstream 0.5kb downstream 500 false Chr5: 515897-516396 Arabidopsis thaliana
AT5G02400 1.0kb upstream 1.0kb upstream 3336 true Chr5: 512561-515896 Arabidopsis thaliana
AT5G02400 1.0kb upstream 1.0kb upstream 1000 false Chr5: 512561-513560 Arabidopsis thaliana
AT5G02400 1.0kb downstream 1.0kb downstream 3336 true Chr5: 513561-516896 Arabidopsis thaliana
AT5G02400 1.0kb downstream 1.0kb downstream 1000 false Chr5: 515897-516896 Arabidopsis thaliana
AT5G02400 2.0kb upstream 2.0kb upstream 4336 true Chr5: 511561-515896 Arabidopsis thaliana
AT5G02400 2.0kb upstream 2.0kb upstream 2000 false Chr5: 511561-513560 Arabidopsis thaliana
AT5G02400 2.0kb downstream 2.0kb downstream 4336 true Chr5: 513561-517896 Arabidopsis thaliana
AT5G02400 2.0kb downstream 2.0kb downstream 2000 false Chr5: 515897-517896 Arabidopsis thaliana
AT5G02400 5.0kb upstream 5.0kb upstream 7336 true Chr5: 508561-515896 Arabidopsis thaliana
AT5G02400 5.0kb upstream 5.0kb upstream 5000 false Chr5: 508561-513560 Arabidopsis thaliana
AT5G02400 5.0kb downstream 5.0kb downstream 7336 true Chr5: 513561-520896 Arabidopsis thaliana
AT5G02400 5.0kb downstream 5.0kb downstream 5000 false Chr5: 515897-520896 Arabidopsis thaliana
AT5G02400 10.0kb upstream 10.0kb upstream 12336 true Chr5: 503561-515896 Arabidopsis thaliana
AT5G02400 10.0kb upstream 10.0kb upstream 10000 false Chr5: 503561-513560 Arabidopsis thaliana
AT5G02400 10.0kb downstream 10.0kb downstream 12336 true Chr5: 513561-525896 Arabidopsis thaliana
AT5G02400 10.0kb downstream 10.0kb downstream 10000 false Chr5: 515897-525896 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122796170 5272 Eudicot View MSA
122376880 5261 Brassicaceae View MSA
123801382 5264 Brassicales-Malvales View MSA
124298693 5266 SBM View MSA
124253044 5268 Malvidae View MSA
124067755 5270 Rosid View MSA
123739663 5271 Pentapetalae View MSA
122050324 5273 Angiosperm View MSA
121349190 5274 Embryophyte View MSA
123381206 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.628        
cufflinks 3.482        
cufflinks 0.664        
cufflinks 3.113        
cufflinks 0.41       Low
cufflinks 3.11        

0 Strain