Gene : DPA A. thaliana TAIR10
Primary Identifier:  ? AT5G02470 Defline:  (1 of 1) PTHR12548//PTHR12548:SF14 - TRANSCRIPTION FACTOR DP // TRANSCRIPTION FACTOR-LIKE PROTEIN DPA
Genomic Order:  155 Name:  ? AT5G02470
Secondary Identifier:  ? PAC:19670525
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G02470 0.5kb upstream 0.5kb upstream 3043 true Chr5: 542358-545400 Arabidopsis thaliana
AT5G02470 0.5kb upstream 0.5kb upstream 500 false Chr5: 544901-545400 Arabidopsis thaliana
AT5G02470 0.5kb downstream 0.5kb downstream 3043 true Chr5: 541858-544900 Arabidopsis thaliana
AT5G02470 0.5kb downstream 0.5kb downstream 500 false Chr5: 541858-542357 Arabidopsis thaliana
AT5G02470 1.0kb upstream 1.0kb upstream 3543 true Chr5: 542358-545900 Arabidopsis thaliana
AT5G02470 1.0kb upstream 1.0kb upstream 1000 false Chr5: 544901-545900 Arabidopsis thaliana
AT5G02470 1.0kb downstream 1.0kb downstream 3543 true Chr5: 541358-544900 Arabidopsis thaliana
AT5G02470 1.0kb downstream 1.0kb downstream 1000 false Chr5: 541358-542357 Arabidopsis thaliana
AT5G02470 2.0kb upstream 2.0kb upstream 4543 true Chr5: 542358-546900 Arabidopsis thaliana
AT5G02470 2.0kb upstream 2.0kb upstream 2000 false Chr5: 544901-546900 Arabidopsis thaliana
AT5G02470 2.0kb downstream 2.0kb downstream 4543 true Chr5: 540358-544900 Arabidopsis thaliana
AT5G02470 2.0kb downstream 2.0kb downstream 2000 false Chr5: 540358-542357 Arabidopsis thaliana
AT5G02470 5.0kb upstream 5.0kb upstream 7543 true Chr5: 542358-549900 Arabidopsis thaliana
AT5G02470 5.0kb upstream 5.0kb upstream 5000 false Chr5: 544901-549900 Arabidopsis thaliana
AT5G02470 5.0kb downstream 5.0kb downstream 7543 true Chr5: 537358-544900 Arabidopsis thaliana
AT5G02470 5.0kb downstream 5.0kb downstream 5000 false Chr5: 537358-542357 Arabidopsis thaliana
AT5G02470 10.0kb upstream 10.0kb upstream 12543 true Chr5: 542358-554900 Arabidopsis thaliana
AT5G02470 10.0kb upstream 10.0kb upstream 10000 false Chr5: 544901-554900 Arabidopsis thaliana
AT5G02470 10.0kb downstream 10.0kb downstream 12543 true Chr5: 532358-544900 Arabidopsis thaliana
AT5G02470 10.0kb downstream 10.0kb downstream 10000 false Chr5: 532358-542357 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370244 5261 Brassicaceae View MSA
123839640 5264 Brassicales-Malvales View MSA
124322629 5266 SBM View MSA
124169186 5268 Malvidae View MSA
124072361 5270 Rosid View MSA
123751632 5271 Pentapetalae View MSA
122791704 5272 Eudicot View MSA
122050879 5273 Angiosperm View MSA
121349411 5274 Embryophyte View MSA
123427533 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.178        
cufflinks 1.779        
cufflinks 1.052       Low
cufflinks 1.665        
cufflinks 1.041       Low
cufflinks 1.775        

0 Strain