Gene : AT5G01870 A. thaliana TAIR10
Defline:  (1 of 2) PTHR33076:SF1 - NON-SPECIFIC LIPID-TRANSFER PROTEIN 10-RELATED Genomic Order:  94
Name:  ? AT5G01870 Secondary Identifier:  ? PAC:19669323
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G01870 0.5kb upstream 0.5kb upstream 1144 true Chr5: 336677-337820 Arabidopsis thaliana
AT5G01870 0.5kb upstream 0.5kb upstream 500 false Chr5: 336677-337176 Arabidopsis thaliana
AT5G01870 0.5kb downstream 0.5kb downstream 1144 true Chr5: 337177-338320 Arabidopsis thaliana
AT5G01870 0.5kb downstream 0.5kb downstream 500 false Chr5: 337821-338320 Arabidopsis thaliana
AT5G01870 1.0kb upstream 1.0kb upstream 1644 true Chr5: 336177-337820 Arabidopsis thaliana
AT5G01870 1.0kb upstream 1.0kb upstream 1000 false Chr5: 336177-337176 Arabidopsis thaliana
AT5G01870 1.0kb downstream 1.0kb downstream 1644 true Chr5: 337177-338820 Arabidopsis thaliana
AT5G01870 1.0kb downstream 1.0kb downstream 1000 false Chr5: 337821-338820 Arabidopsis thaliana
AT5G01870 2.0kb upstream 2.0kb upstream 2644 true Chr5: 335177-337820 Arabidopsis thaliana
AT5G01870 2.0kb upstream 2.0kb upstream 2000 false Chr5: 335177-337176 Arabidopsis thaliana
AT5G01870 2.0kb downstream 2.0kb downstream 2644 true Chr5: 337177-339820 Arabidopsis thaliana
AT5G01870 2.0kb downstream 2.0kb downstream 2000 false Chr5: 337821-339820 Arabidopsis thaliana
AT5G01870 5.0kb upstream 5.0kb upstream 5644 true Chr5: 332177-337820 Arabidopsis thaliana
AT5G01870 5.0kb upstream 5.0kb upstream 5000 false Chr5: 332177-337176 Arabidopsis thaliana
AT5G01870 5.0kb downstream 5.0kb downstream 5644 true Chr5: 337177-342820 Arabidopsis thaliana
AT5G01870 5.0kb downstream 5.0kb downstream 5000 false Chr5: 337821-342820 Arabidopsis thaliana
AT5G01870 10.0kb upstream 10.0kb upstream 10644 true Chr5: 327177-337820 Arabidopsis thaliana
AT5G01870 10.0kb upstream 10.0kb upstream 10000 false Chr5: 327177-337176 Arabidopsis thaliana
AT5G01870 10.0kb downstream 10.0kb downstream 10644 true Chr5: 337177-347820 Arabidopsis thaliana
AT5G01870 10.0kb downstream 10.0kb downstream 10000 false Chr5: 337821-347820 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362257 5261 Brassicaceae View MSA
123840220 5264 Brassicales-Malvales View MSA
124346813 5266 SBM View MSA
124254589 5268 Malvidae View MSA
124074379 5270 Rosid View MSA
123753232 5271 Pentapetalae View MSA
122797090 5272 Eudicot View MSA
122049972 5273 Angiosperm View MSA
121351248 5274 Embryophyte View MSA
123382075 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.623        
cufflinks 39.826     High  
cufflinks 1.129       Low
cufflinks 75.759     High High
cufflinks 1.592        
cufflinks 35.543     High  

0 Strain