Gene : AT5G04480 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12526//PTHR12526:SF354 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  373
Name:  ? AT5G04480 Secondary Identifier:  ? PAC:19665520
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G04480 0.5kb upstream 0.5kb upstream 6973 true Chr5: 1271513-1278485 Arabidopsis thaliana
AT5G04480 0.5kb upstream 0.5kb upstream 500 false Chr5: 1277986-1278485 Arabidopsis thaliana
AT5G04480 0.5kb downstream 0.5kb downstream 6973 true Chr5: 1271013-1277985 Arabidopsis thaliana
AT5G04480 0.5kb downstream 0.5kb downstream 500 false Chr5: 1271013-1271512 Arabidopsis thaliana
AT5G04480 1.0kb upstream 1.0kb upstream 7473 true Chr5: 1271513-1278985 Arabidopsis thaliana
AT5G04480 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1277986-1278985 Arabidopsis thaliana
AT5G04480 1.0kb downstream 1.0kb downstream 7473 true Chr5: 1270513-1277985 Arabidopsis thaliana
AT5G04480 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1270513-1271512 Arabidopsis thaliana
AT5G04480 2.0kb upstream 2.0kb upstream 8473 true Chr5: 1271513-1279985 Arabidopsis thaliana
AT5G04480 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1277986-1279985 Arabidopsis thaliana
AT5G04480 2.0kb downstream 2.0kb downstream 8473 true Chr5: 1269513-1277985 Arabidopsis thaliana
AT5G04480 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1269513-1271512 Arabidopsis thaliana
AT5G04480 5.0kb upstream 5.0kb upstream 11473 true Chr5: 1271513-1282985 Arabidopsis thaliana
AT5G04480 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1277986-1282985 Arabidopsis thaliana
AT5G04480 5.0kb downstream 5.0kb downstream 11473 true Chr5: 1266513-1277985 Arabidopsis thaliana
AT5G04480 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1266513-1271512 Arabidopsis thaliana
AT5G04480 10.0kb upstream 10.0kb upstream 16473 true Chr5: 1271513-1287985 Arabidopsis thaliana
AT5G04480 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1277986-1287985 Arabidopsis thaliana
AT5G04480 10.0kb downstream 10.0kb downstream 16473 true Chr5: 1261513-1277985 Arabidopsis thaliana
AT5G04480 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1261513-1271512 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370864 5261 Brassicaceae View MSA
123830275 5264 Brassicales-Malvales View MSA
124342551 5266 SBM View MSA
124241198 5268 Malvidae View MSA
124067437 5270 Rosid View MSA
123740288 5271 Pentapetalae View MSA
122789859 5272 Eudicot View MSA
122043376 5273 Angiosperm View MSA
121346761 5274 Embryophyte View MSA
123380440 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.2        
cufflinks 8.964        
cufflinks 3.094       Low
cufflinks 7.645        
cufflinks 3.891        
cufflinks 10.492       High

0 Strain