Gene : ACA3 A. thaliana TAIR10
Primary Identifier:  ? AT5G04180 Defline:  (1 of 3) PTHR18952//PTHR18952:SF111 - CARBONIC ANHYDRASE // ALPHA CARBONIC ANHYDRASE 3
Genomic Order:  341 Name:  ? AT5G04180
Secondary Identifier:  ? PAC:19671171
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana CYANCAT-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-241 Arabidopsis thaliana pathologic  
Athaliana PWY-7115 Arabidopsis thaliana pathologic  
Athaliana PWY-7117 Arabidopsis thaliana pathologic  
Athaliana PWYQT-4429 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G04180 0.5kb upstream 0.5kb upstream 2137 true Chr5: 1147648-1149784 Arabidopsis thaliana
AT5G04180 0.5kb upstream 0.5kb upstream 500 false Chr5: 1149285-1149784 Arabidopsis thaliana
AT5G04180 0.5kb downstream 0.5kb downstream 2137 true Chr5: 1147148-1149284 Arabidopsis thaliana
AT5G04180 0.5kb downstream 0.5kb downstream 500 false Chr5: 1147148-1147647 Arabidopsis thaliana
AT5G04180 1.0kb upstream 1.0kb upstream 2637 true Chr5: 1147648-1150284 Arabidopsis thaliana
AT5G04180 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1149285-1150284 Arabidopsis thaliana
AT5G04180 1.0kb downstream 1.0kb downstream 2637 true Chr5: 1146648-1149284 Arabidopsis thaliana
AT5G04180 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1146648-1147647 Arabidopsis thaliana
AT5G04180 2.0kb upstream 2.0kb upstream 3637 true Chr5: 1147648-1151284 Arabidopsis thaliana
AT5G04180 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1149285-1151284 Arabidopsis thaliana
AT5G04180 2.0kb downstream 2.0kb downstream 3637 true Chr5: 1145648-1149284 Arabidopsis thaliana
AT5G04180 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1145648-1147647 Arabidopsis thaliana
AT5G04180 5.0kb upstream 5.0kb upstream 6637 true Chr5: 1147648-1154284 Arabidopsis thaliana
AT5G04180 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1149285-1154284 Arabidopsis thaliana
AT5G04180 5.0kb downstream 5.0kb downstream 6637 true Chr5: 1142648-1149284 Arabidopsis thaliana
AT5G04180 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1142648-1147647 Arabidopsis thaliana
AT5G04180 10.0kb upstream 10.0kb upstream 11637 true Chr5: 1147648-1159284 Arabidopsis thaliana
AT5G04180 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1149285-1159284 Arabidopsis thaliana
AT5G04180 10.0kb downstream 10.0kb downstream 11637 true Chr5: 1137648-1149284 Arabidopsis thaliana
AT5G04180 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1137648-1147647 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510291 5273 Angiosperm View MSA
122361579 5261 Brassicaceae View MSA
123798204 5264 Brassicales-Malvales View MSA
124295875 5266 SBM View MSA
124148192 5268 Malvidae View MSA
123874239 5270 Rosid View MSA
123458243 5271 Pentapetalae View MSA
122493651 5272 Eudicot View MSA
120783396 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.033     Low  
cufflinks 0.009     Low Low

0 Strain