Gene : SDP1 A. thaliana TAIR10
Primary Identifier:  ? AT5G04040 Defline:  (1 of 2) K14674 - TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase (TGL4)
Genomic Order:  326 Name:  ? AT5G04040
Secondary Identifier:  ? PAC:19671050
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana LIPAS-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G04040 0.5kb upstream 0.5kb upstream 4338 true Chr5: 1088842-1093179 Arabidopsis thaliana
AT5G04040 0.5kb upstream 0.5kb upstream 500 false Chr5: 1088842-1089341 Arabidopsis thaliana
AT5G04040 0.5kb downstream 0.5kb downstream 4338 true Chr5: 1089342-1093679 Arabidopsis thaliana
AT5G04040 0.5kb downstream 0.5kb downstream 500 false Chr5: 1093180-1093679 Arabidopsis thaliana
AT5G04040 1.0kb upstream 1.0kb upstream 4838 true Chr5: 1088342-1093179 Arabidopsis thaliana
AT5G04040 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1088342-1089341 Arabidopsis thaliana
AT5G04040 1.0kb downstream 1.0kb downstream 4838 true Chr5: 1089342-1094179 Arabidopsis thaliana
AT5G04040 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1093180-1094179 Arabidopsis thaliana
AT5G04040 2.0kb upstream 2.0kb upstream 5838 true Chr5: 1087342-1093179 Arabidopsis thaliana
AT5G04040 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1087342-1089341 Arabidopsis thaliana
AT5G04040 2.0kb downstream 2.0kb downstream 5838 true Chr5: 1089342-1095179 Arabidopsis thaliana
AT5G04040 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1093180-1095179 Arabidopsis thaliana
AT5G04040 5.0kb upstream 5.0kb upstream 8838 true Chr5: 1084342-1093179 Arabidopsis thaliana
AT5G04040 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1084342-1089341 Arabidopsis thaliana
AT5G04040 5.0kb downstream 5.0kb downstream 8838 true Chr5: 1089342-1098179 Arabidopsis thaliana
AT5G04040 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1093180-1098179 Arabidopsis thaliana
AT5G04040 10.0kb upstream 10.0kb upstream 13838 true Chr5: 1079342-1093179 Arabidopsis thaliana
AT5G04040 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1079342-1089341 Arabidopsis thaliana
AT5G04040 10.0kb downstream 10.0kb downstream 13838 true Chr5: 1089342-1103179 Arabidopsis thaliana
AT5G04040 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1093180-1103179 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360765 5261 Brassicaceae View MSA
123830631 5264 Brassicales-Malvales View MSA
124343533 5266 SBM View MSA
124237785 5268 Malvidae View MSA
124066433 5270 Rosid View MSA
123736830 5271 Pentapetalae View MSA
122788916 5272 Eudicot View MSA
122044484 5273 Angiosperm View MSA
121347112 5274 Embryophyte View MSA
123426433 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.366        
cufflinks 12.992        
cufflinks 21.071        
cufflinks 15.637        
cufflinks 25.416       High
cufflinks 12.484       Low

0 Strain