Gene : AT5G07090 A. thaliana TAIR10
Defline:  (1 of 3) K02987 - small subunit ribosomal protein S4e (RP-S4e, RPS4) Genomic Order:  643
Name:  ? AT5G07090 Secondary Identifier:  ? PAC:19671360
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G07090 0.5kb upstream 0.5kb upstream 2199 true Chr5: 2201880-2204078 Arabidopsis thaliana
AT5G07090 0.5kb upstream 0.5kb upstream 500 false Chr5: 2201880-2202379 Arabidopsis thaliana
AT5G07090 0.5kb downstream 0.5kb downstream 2199 true Chr5: 2202380-2204578 Arabidopsis thaliana
AT5G07090 0.5kb downstream 0.5kb downstream 500 false Chr5: 2204079-2204578 Arabidopsis thaliana
AT5G07090 1.0kb upstream 1.0kb upstream 2699 true Chr5: 2201380-2204078 Arabidopsis thaliana
AT5G07090 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2201380-2202379 Arabidopsis thaliana
AT5G07090 1.0kb downstream 1.0kb downstream 2699 true Chr5: 2202380-2205078 Arabidopsis thaliana
AT5G07090 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2204079-2205078 Arabidopsis thaliana
AT5G07090 2.0kb upstream 2.0kb upstream 3699 true Chr5: 2200380-2204078 Arabidopsis thaliana
AT5G07090 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2200380-2202379 Arabidopsis thaliana
AT5G07090 2.0kb downstream 2.0kb downstream 3699 true Chr5: 2202380-2206078 Arabidopsis thaliana
AT5G07090 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2204079-2206078 Arabidopsis thaliana
AT5G07090 5.0kb upstream 5.0kb upstream 6699 true Chr5: 2197380-2204078 Arabidopsis thaliana
AT5G07090 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2197380-2202379 Arabidopsis thaliana
AT5G07090 5.0kb downstream 5.0kb downstream 6699 true Chr5: 2202380-2209078 Arabidopsis thaliana
AT5G07090 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2204079-2209078 Arabidopsis thaliana
AT5G07090 10.0kb upstream 10.0kb upstream 11699 true Chr5: 2192380-2204078 Arabidopsis thaliana
AT5G07090 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2192380-2202379 Arabidopsis thaliana
AT5G07090 10.0kb downstream 10.0kb downstream 11699 true Chr5: 2202380-2214078 Arabidopsis thaliana
AT5G07090 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2204079-2214078 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380883 5261 Brassicaceae View MSA
123838802 5264 Brassicales-Malvales View MSA
124336742 5266 SBM View MSA
124243857 5268 Malvidae View MSA
124070579 5270 Rosid View MSA
123750810 5271 Pentapetalae View MSA
122793916 5272 Eudicot View MSA
122046993 5273 Angiosperm View MSA
121344969 5274 Embryophyte View MSA
123426872 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 92.772     High  
cufflinks 115.694     High  
cufflinks 86.945     High  
cufflinks 120.23     High  
cufflinks 72.637     High Low
cufflinks 141.289     High High

0 Strain