Gene : AT5G06970 A. thaliana TAIR10
Defline:  (1 of 6) PF05664 - Plant family of unknown function (DUF810) (DUF810) Genomic Order:  631
Name:  ? AT5G06970 Secondary Identifier:  ? PAC:19666649
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G06970 0.5kb upstream 0.5kb upstream 8671 true Chr5: 2158228-2166898 Arabidopsis thaliana
AT5G06970 0.5kb upstream 0.5kb upstream 500 false Chr5: 2166399-2166898 Arabidopsis thaliana
AT5G06970 0.5kb downstream 0.5kb downstream 8671 true Chr5: 2157728-2166398 Arabidopsis thaliana
AT5G06970 0.5kb downstream 0.5kb downstream 500 false Chr5: 2157728-2158227 Arabidopsis thaliana
AT5G06970 1.0kb upstream 1.0kb upstream 9171 true Chr5: 2158228-2167398 Arabidopsis thaliana
AT5G06970 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2166399-2167398 Arabidopsis thaliana
AT5G06970 1.0kb downstream 1.0kb downstream 9171 true Chr5: 2157228-2166398 Arabidopsis thaliana
AT5G06970 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2157228-2158227 Arabidopsis thaliana
AT5G06970 2.0kb upstream 2.0kb upstream 10171 true Chr5: 2158228-2168398 Arabidopsis thaliana
AT5G06970 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2166399-2168398 Arabidopsis thaliana
AT5G06970 2.0kb downstream 2.0kb downstream 10171 true Chr5: 2156228-2166398 Arabidopsis thaliana
AT5G06970 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2156228-2158227 Arabidopsis thaliana
AT5G06970 5.0kb upstream 5.0kb upstream 13171 true Chr5: 2158228-2171398 Arabidopsis thaliana
AT5G06970 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2166399-2171398 Arabidopsis thaliana
AT5G06970 5.0kb downstream 5.0kb downstream 13171 true Chr5: 2153228-2166398 Arabidopsis thaliana
AT5G06970 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2153228-2158227 Arabidopsis thaliana
AT5G06970 10.0kb upstream 10.0kb upstream 18171 true Chr5: 2158228-2176398 Arabidopsis thaliana
AT5G06970 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2166399-2176398 Arabidopsis thaliana
AT5G06970 10.0kb downstream 10.0kb downstream 18171 true Chr5: 2148228-2166398 Arabidopsis thaliana
AT5G06970 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2148228-2158227 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365495 5261 Brassicaceae View MSA
123834858 5264 Brassicales-Malvales View MSA
124350737 5266 SBM View MSA
124242457 5268 Malvidae View MSA
124066580 5270 Rosid View MSA
123740200 5271 Pentapetalae View MSA
122788861 5272 Eudicot View MSA
122045218 5273 Angiosperm View MSA
121344209 5274 Embryophyte View MSA
123427931 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.954       Low
cufflinks 10.898        
cufflinks 6.205        
cufflinks 12.406       High
cufflinks 6.905        
cufflinks 11.865        

0 Strain