Gene : 2-Cys Prx B A. thaliana TAIR10
Primary Identifier:  ? AT5G06290 Defline:  (1 of 2) PTHR10681//PTHR10681:SF108 - THIOREDOXIN PEROXIDASE // 2-CYS PEROXIREDOXIN BAS1, CHLOROPLASTIC
Genomic Order:  562 Name:  ? AT5G06290
Secondary Identifier:  ? PAC:19666700
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G06290 0.5kb upstream 0.5kb upstream 2713 true Chr5: 1918713-1921425 Arabidopsis thaliana
AT5G06290 0.5kb upstream 0.5kb upstream 500 false Chr5: 1918713-1919212 Arabidopsis thaliana
AT5G06290 0.5kb downstream 0.5kb downstream 2713 true Chr5: 1919213-1921925 Arabidopsis thaliana
AT5G06290 0.5kb downstream 0.5kb downstream 500 false Chr5: 1921426-1921925 Arabidopsis thaliana
AT5G06290 1.0kb upstream 1.0kb upstream 3213 true Chr5: 1918213-1921425 Arabidopsis thaliana
AT5G06290 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1918213-1919212 Arabidopsis thaliana
AT5G06290 1.0kb downstream 1.0kb downstream 3213 true Chr5: 1919213-1922425 Arabidopsis thaliana
AT5G06290 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1921426-1922425 Arabidopsis thaliana
AT5G06290 2.0kb upstream 2.0kb upstream 4213 true Chr5: 1917213-1921425 Arabidopsis thaliana
AT5G06290 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1917213-1919212 Arabidopsis thaliana
AT5G06290 2.0kb downstream 2.0kb downstream 4213 true Chr5: 1919213-1923425 Arabidopsis thaliana
AT5G06290 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1921426-1923425 Arabidopsis thaliana
AT5G06290 5.0kb upstream 5.0kb upstream 7213 true Chr5: 1914213-1921425 Arabidopsis thaliana
AT5G06290 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1914213-1919212 Arabidopsis thaliana
AT5G06290 5.0kb downstream 5.0kb downstream 7213 true Chr5: 1919213-1926425 Arabidopsis thaliana
AT5G06290 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1921426-1926425 Arabidopsis thaliana
AT5G06290 10.0kb upstream 10.0kb upstream 12213 true Chr5: 1909213-1921425 Arabidopsis thaliana
AT5G06290 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1909213-1919212 Arabidopsis thaliana
AT5G06290 10.0kb downstream 10.0kb downstream 12213 true Chr5: 1919213-1931425 Arabidopsis thaliana
AT5G06290 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1921426-1931425 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375433 5261 Brassicaceae View MSA
123837147 5264 Brassicales-Malvales View MSA
124340579 5266 SBM View MSA
124236940 5268 Malvidae View MSA
124063631 5270 Rosid View MSA
123745586 5271 Pentapetalae View MSA
122792767 5272 Eudicot View MSA
122043965 5273 Angiosperm View MSA
121346960 5274 Embryophyte View MSA
123424138 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 86.372     High  
cufflinks 9.793        
cufflinks 87.432     High High
cufflinks 9.552        
cufflinks 63.988     High  
cufflinks 10.186        

0 Strain