Gene : AT5G06130 A. thaliana TAIR10
Defline:  (1 of 1) PTHR15852:SF8 - CHAPERONE PROTEIN DNAJ-LIKE PROTEIN Genomic Order:  545
Name:  ? AT5G06130 Secondary Identifier:  ? PAC:19671112
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G06130 0.5kb upstream 0.5kb upstream 2957 true Chr5: 1853432-1856388 Arabidopsis thaliana
AT5G06130 0.5kb upstream 0.5kb upstream 500 false Chr5: 1855889-1856388 Arabidopsis thaliana
AT5G06130 0.5kb downstream 0.5kb downstream 2957 true Chr5: 1852932-1855888 Arabidopsis thaliana
AT5G06130 0.5kb downstream 0.5kb downstream 500 false Chr5: 1852932-1853431 Arabidopsis thaliana
AT5G06130 1.0kb upstream 1.0kb upstream 3457 true Chr5: 1853432-1856888 Arabidopsis thaliana
AT5G06130 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1855889-1856888 Arabidopsis thaliana
AT5G06130 1.0kb downstream 1.0kb downstream 3457 true Chr5: 1852432-1855888 Arabidopsis thaliana
AT5G06130 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1852432-1853431 Arabidopsis thaliana
AT5G06130 2.0kb upstream 2.0kb upstream 4457 true Chr5: 1853432-1857888 Arabidopsis thaliana
AT5G06130 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1855889-1857888 Arabidopsis thaliana
AT5G06130 2.0kb downstream 2.0kb downstream 4457 true Chr5: 1851432-1855888 Arabidopsis thaliana
AT5G06130 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1851432-1853431 Arabidopsis thaliana
AT5G06130 5.0kb upstream 5.0kb upstream 7457 true Chr5: 1853432-1860888 Arabidopsis thaliana
AT5G06130 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1855889-1860888 Arabidopsis thaliana
AT5G06130 5.0kb downstream 5.0kb downstream 7457 true Chr5: 1848432-1855888 Arabidopsis thaliana
AT5G06130 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1848432-1853431 Arabidopsis thaliana
AT5G06130 10.0kb upstream 10.0kb upstream 12457 true Chr5: 1853432-1865888 Arabidopsis thaliana
AT5G06130 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1855889-1865888 Arabidopsis thaliana
AT5G06130 10.0kb downstream 10.0kb downstream 12457 true Chr5: 1843432-1855888 Arabidopsis thaliana
AT5G06130 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1843432-1853431 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370313 5261 Brassicaceae View MSA
123833876 5264 Brassicales-Malvales View MSA
124338740 5266 SBM View MSA
124237903 5268 Malvidae View MSA
124069527 5270 Rosid View MSA
123737548 5271 Pentapetalae View MSA
122792057 5272 Eudicot View MSA
122048573 5273 Angiosperm View MSA
121345150 5274 Embryophyte View MSA
123426769 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.089        
cufflinks 4.009        
cufflinks 17.845       High
cufflinks 4.177        
cufflinks 16.968        
cufflinks 2.649       Low

0 Strain