Gene : GCP2 A. thaliana TAIR10
Primary Identifier:  ? AT5G05620 Defline:  (1 of 2) K10389 - tubulin gamma (TUBG)
Genomic Order:  490 Name:  ? AT5G05620
Secondary Identifier:  ? PAC:19668302
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5695 Arabidopsis thaliana pathologic  
Athaliana PWY-6608 Arabidopsis thaliana pathologic  
Athaliana PWY-6609 Arabidopsis thaliana pathologic  
Athaliana PWY-7179 Arabidopsis thaliana pathologic  
Athaliana SALVADEHYPOX-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G05620 0.5kb upstream 0.5kb upstream 2976 true Chr5: 1678744-1681719 Arabidopsis thaliana
AT5G05620 0.5kb upstream 0.5kb upstream 500 false Chr5: 1678744-1679243 Arabidopsis thaliana
AT5G05620 0.5kb downstream 0.5kb downstream 2976 true Chr5: 1679244-1682219 Arabidopsis thaliana
AT5G05620 0.5kb downstream 0.5kb downstream 500 false Chr5: 1681720-1682219 Arabidopsis thaliana
AT5G05620 1.0kb upstream 1.0kb upstream 3476 true Chr5: 1678244-1681719 Arabidopsis thaliana
AT5G05620 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1678244-1679243 Arabidopsis thaliana
AT5G05620 1.0kb downstream 1.0kb downstream 3476 true Chr5: 1679244-1682719 Arabidopsis thaliana
AT5G05620 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1681720-1682719 Arabidopsis thaliana
AT5G05620 2.0kb upstream 2.0kb upstream 4476 true Chr5: 1677244-1681719 Arabidopsis thaliana
AT5G05620 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1677244-1679243 Arabidopsis thaliana
AT5G05620 2.0kb downstream 2.0kb downstream 4476 true Chr5: 1679244-1683719 Arabidopsis thaliana
AT5G05620 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1681720-1683719 Arabidopsis thaliana
AT5G05620 5.0kb upstream 5.0kb upstream 7476 true Chr5: 1674244-1681719 Arabidopsis thaliana
AT5G05620 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1674244-1679243 Arabidopsis thaliana
AT5G05620 5.0kb downstream 5.0kb downstream 7476 true Chr5: 1679244-1686719 Arabidopsis thaliana
AT5G05620 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1681720-1686719 Arabidopsis thaliana
AT5G05620 10.0kb upstream 10.0kb upstream 12476 true Chr5: 1669244-1681719 Arabidopsis thaliana
AT5G05620 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1669244-1679243 Arabidopsis thaliana
AT5G05620 10.0kb downstream 10.0kb downstream 12476 true Chr5: 1679244-1691719 Arabidopsis thaliana
AT5G05620 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1681720-1691719 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380888 5261 Brassicaceae View MSA
123836063 5264 Brassicales-Malvales View MSA
124337609 5266 SBM View MSA
124248076 5268 Malvidae View MSA
124064606 5270 Rosid View MSA
123746134 5271 Pentapetalae View MSA
122785812 5272 Eudicot View MSA
122042290 5273 Angiosperm View MSA
121346688 5274 Embryophyte View MSA
123428620 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.805        
cufflinks 12.228        
cufflinks 5.868        
cufflinks 12.717        
cufflinks 5.256       Low
cufflinks 14.306       High

0 Strain