Gene : AT5G07900 A. thaliana TAIR10
Defline:  (1 of 2) PTHR13068:SF28 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN-RELATED Genomic Order:  728
Name:  ? AT5G07900 Secondary Identifier:  ? PAC:19668379
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G07900 0.5kb upstream 0.5kb upstream 1878 true Chr5: 2519669-2521546 Arabidopsis thaliana
AT5G07900 0.5kb upstream 0.5kb upstream 500 false Chr5: 2519669-2520168 Arabidopsis thaliana
AT5G07900 0.5kb downstream 0.5kb downstream 1878 true Chr5: 2520169-2522046 Arabidopsis thaliana
AT5G07900 0.5kb downstream 0.5kb downstream 500 false Chr5: 2521547-2522046 Arabidopsis thaliana
AT5G07900 1.0kb upstream 1.0kb upstream 2378 true Chr5: 2519169-2521546 Arabidopsis thaliana
AT5G07900 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2519169-2520168 Arabidopsis thaliana
AT5G07900 1.0kb downstream 1.0kb downstream 2378 true Chr5: 2520169-2522546 Arabidopsis thaliana
AT5G07900 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2521547-2522546 Arabidopsis thaliana
AT5G07900 2.0kb upstream 2.0kb upstream 3378 true Chr5: 2518169-2521546 Arabidopsis thaliana
AT5G07900 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2518169-2520168 Arabidopsis thaliana
AT5G07900 2.0kb downstream 2.0kb downstream 3378 true Chr5: 2520169-2523546 Arabidopsis thaliana
AT5G07900 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2521547-2523546 Arabidopsis thaliana
AT5G07900 5.0kb upstream 5.0kb upstream 6378 true Chr5: 2515169-2521546 Arabidopsis thaliana
AT5G07900 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2515169-2520168 Arabidopsis thaliana
AT5G07900 5.0kb downstream 5.0kb downstream 6378 true Chr5: 2520169-2526546 Arabidopsis thaliana
AT5G07900 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2521547-2526546 Arabidopsis thaliana
AT5G07900 10.0kb upstream 10.0kb upstream 11378 true Chr5: 2510169-2521546 Arabidopsis thaliana
AT5G07900 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2510169-2520168 Arabidopsis thaliana
AT5G07900 10.0kb downstream 10.0kb downstream 11378 true Chr5: 2520169-2531546 Arabidopsis thaliana
AT5G07900 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2521547-2531546 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362480 5261 Brassicaceae View MSA
123841527 5264 Brassicales-Malvales View MSA
124351545 5266 SBM View MSA
124253212 5268 Malvidae View MSA
124073923 5270 Rosid View MSA
123752887 5271 Pentapetalae View MSA
122796698 5272 Eudicot View MSA
122050390 5273 Angiosperm View MSA
121351168 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.517        
cufflinks 2.916        
cufflinks 9.15       High
cufflinks 2.945        
cufflinks 5.441        
cufflinks 2.823        

0 Strain