Gene : AT5G07260 A. thaliana TAIR10
Defline:  (1 of 2) PTHR24326:SF187 - HOMEODOMAIN PROTEIN-RELATED Genomic Order:  661
Name:  ? AT5G07260 Secondary Identifier:  ? PAC:19667601
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G07260 0.5kb upstream 0.5kb upstream 2969 true Chr5: 2277313-2280281 Arabidopsis thaliana
AT5G07260 0.5kb upstream 0.5kb upstream 500 false Chr5: 2277313-2277812 Arabidopsis thaliana
AT5G07260 0.5kb downstream 0.5kb downstream 2969 true Chr5: 2277813-2280781 Arabidopsis thaliana
AT5G07260 0.5kb downstream 0.5kb downstream 500 false Chr5: 2280282-2280781 Arabidopsis thaliana
AT5G07260 1.0kb upstream 1.0kb upstream 3469 true Chr5: 2276813-2280281 Arabidopsis thaliana
AT5G07260 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2276813-2277812 Arabidopsis thaliana
AT5G07260 1.0kb downstream 1.0kb downstream 3469 true Chr5: 2277813-2281281 Arabidopsis thaliana
AT5G07260 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2280282-2281281 Arabidopsis thaliana
AT5G07260 2.0kb upstream 2.0kb upstream 4469 true Chr5: 2275813-2280281 Arabidopsis thaliana
AT5G07260 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2275813-2277812 Arabidopsis thaliana
AT5G07260 2.0kb downstream 2.0kb downstream 4469 true Chr5: 2277813-2282281 Arabidopsis thaliana
AT5G07260 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2280282-2282281 Arabidopsis thaliana
AT5G07260 5.0kb upstream 5.0kb upstream 7469 true Chr5: 2272813-2280281 Arabidopsis thaliana
AT5G07260 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2272813-2277812 Arabidopsis thaliana
AT5G07260 5.0kb downstream 5.0kb downstream 7469 true Chr5: 2277813-2285281 Arabidopsis thaliana
AT5G07260 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2280282-2285281 Arabidopsis thaliana
AT5G07260 10.0kb upstream 10.0kb upstream 12469 true Chr5: 2267813-2280281 Arabidopsis thaliana
AT5G07260 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2267813-2277812 Arabidopsis thaliana
AT5G07260 10.0kb downstream 10.0kb downstream 12469 true Chr5: 2277813-2290281 Arabidopsis thaliana
AT5G07260 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2280282-2290281 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121502581 5273 Angiosperm View MSA
122343098 5261 Brassicaceae View MSA
123783397 5264 Brassicales-Malvales View MSA
124281632 5266 SBM View MSA
124136356 5268 Malvidae View MSA
123864230 5270 Rosid View MSA
123449563 5271 Pentapetalae View MSA
122485095 5272 Eudicot View MSA
120775891 5274 Embryophyte View MSA
122818182 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain