Gene : AT5G09510 A. thaliana TAIR10
Defline:  (1 of 7) K02958 - small subunit ribosomal protein S15e (RP-S15e, RPS15) Genomic Order:  863
Name:  ? AT5G09510 Secondary Identifier:  ? PAC:19668938
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G09510 0.5kb upstream 0.5kb upstream 2061 true Chr5: 2955113-2957173 Arabidopsis thaliana
AT5G09510 0.5kb upstream 0.5kb upstream 500 false Chr5: 2956674-2957173 Arabidopsis thaliana
AT5G09510 0.5kb downstream 0.5kb downstream 2061 true Chr5: 2954613-2956673 Arabidopsis thaliana
AT5G09510 0.5kb downstream 0.5kb downstream 500 false Chr5: 2954613-2955112 Arabidopsis thaliana
AT5G09510 1.0kb upstream 1.0kb upstream 2561 true Chr5: 2955113-2957673 Arabidopsis thaliana
AT5G09510 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2956674-2957673 Arabidopsis thaliana
AT5G09510 1.0kb downstream 1.0kb downstream 2561 true Chr5: 2954113-2956673 Arabidopsis thaliana
AT5G09510 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2954113-2955112 Arabidopsis thaliana
AT5G09510 2.0kb upstream 2.0kb upstream 3561 true Chr5: 2955113-2958673 Arabidopsis thaliana
AT5G09510 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2956674-2958673 Arabidopsis thaliana
AT5G09510 2.0kb downstream 2.0kb downstream 3561 true Chr5: 2953113-2956673 Arabidopsis thaliana
AT5G09510 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2953113-2955112 Arabidopsis thaliana
AT5G09510 5.0kb upstream 5.0kb upstream 6561 true Chr5: 2955113-2961673 Arabidopsis thaliana
AT5G09510 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2956674-2961673 Arabidopsis thaliana
AT5G09510 5.0kb downstream 5.0kb downstream 6561 true Chr5: 2950113-2956673 Arabidopsis thaliana
AT5G09510 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2950113-2955112 Arabidopsis thaliana
AT5G09510 10.0kb upstream 10.0kb upstream 11561 true Chr5: 2955113-2966673 Arabidopsis thaliana
AT5G09510 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2956674-2966673 Arabidopsis thaliana
AT5G09510 10.0kb downstream 10.0kb downstream 11561 true Chr5: 2945113-2956673 Arabidopsis thaliana
AT5G09510 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2945113-2955112 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378956 5261 Brassicaceae View MSA
123834397 5264 Brassicales-Malvales View MSA
124339038 5266 SBM View MSA
124247186 5268 Malvidae View MSA
124072924 5270 Rosid View MSA
123737007 5271 Pentapetalae View MSA
122786475 5272 Eudicot View MSA
122041885 5273 Angiosperm View MSA
121349053 5274 Embryophyte View MSA
123425446 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.365     High  
cufflinks 39.655     High  
cufflinks 37.729     High  
cufflinks 40.676     High  
cufflinks 30.435     High Low
cufflinks 48.757     High High

0 Strain