Gene : AT5G08680 A. thaliana TAIR10
Defline:  (1 of 3) K02133 - F-type H+-transporting ATPase subunit beta (ATPeF1B, ATP5B, ATP2) Genomic Order:  816
Name:  ? AT5G08680 Secondary Identifier:  ? PAC:19667655
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6126 Arabidopsis thaliana pathologic  
Athaliana PWY-7219 Arabidopsis thaliana pathologic  
Athaliana PWY-7229 Arabidopsis thaliana pathologic  
Athaliana PWY-841 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G08680 0.5kb upstream 0.5kb upstream 3539 true Chr5: 2821428-2824966 Arabidopsis thaliana
AT5G08680 0.5kb upstream 0.5kb upstream 500 false Chr5: 2821428-2821927 Arabidopsis thaliana
AT5G08680 0.5kb downstream 0.5kb downstream 3539 true Chr5: 2821928-2825466 Arabidopsis thaliana
AT5G08680 0.5kb downstream 0.5kb downstream 500 false Chr5: 2824967-2825466 Arabidopsis thaliana
AT5G08680 1.0kb upstream 1.0kb upstream 4039 true Chr5: 2820928-2824966 Arabidopsis thaliana
AT5G08680 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2820928-2821927 Arabidopsis thaliana
AT5G08680 1.0kb downstream 1.0kb downstream 4039 true Chr5: 2821928-2825966 Arabidopsis thaliana
AT5G08680 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2824967-2825966 Arabidopsis thaliana
AT5G08680 2.0kb upstream 2.0kb upstream 5039 true Chr5: 2819928-2824966 Arabidopsis thaliana
AT5G08680 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2819928-2821927 Arabidopsis thaliana
AT5G08680 2.0kb downstream 2.0kb downstream 5039 true Chr5: 2821928-2826966 Arabidopsis thaliana
AT5G08680 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2824967-2826966 Arabidopsis thaliana
AT5G08680 5.0kb upstream 5.0kb upstream 8039 true Chr5: 2816928-2824966 Arabidopsis thaliana
AT5G08680 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2816928-2821927 Arabidopsis thaliana
AT5G08680 5.0kb downstream 5.0kb downstream 8039 true Chr5: 2821928-2829966 Arabidopsis thaliana
AT5G08680 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2824967-2829966 Arabidopsis thaliana
AT5G08680 10.0kb upstream 10.0kb upstream 13039 true Chr5: 2811928-2824966 Arabidopsis thaliana
AT5G08680 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2811928-2821927 Arabidopsis thaliana
AT5G08680 10.0kb downstream 10.0kb downstream 13039 true Chr5: 2821928-2834966 Arabidopsis thaliana
AT5G08680 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2824967-2834966 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363454 5261 Brassicaceae View MSA
123798548 5264 Brassicales-Malvales View MSA
124296171 5266 SBM View MSA
124250549 5268 Malvidae View MSA
124072402 5270 Rosid View MSA
123749962 5271 Pentapetalae View MSA
122797810 5272 Eudicot View MSA
122051511 5273 Angiosperm View MSA
121351676 5274 Embryophyte View MSA
123424920 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 62.149     High Low
cufflinks 69.895     High  
cufflinks 67.055     High  
cufflinks 79.913     High High
cufflinks 71.673     High  
cufflinks 80.238     High High

0 Strain