Gene : AT5G11900 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12789 - DENSITY-REGULATED PROTEIN HOMOLOG Genomic Order:  1116
Name:  ? AT5G11900 Secondary Identifier:  ? PAC:19668050
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G11900 0.5kb upstream 0.5kb upstream 2794 true Chr5: 3833485-3836278 Arabidopsis thaliana
AT5G11900 0.5kb upstream 0.5kb upstream 500 false Chr5: 3833485-3833984 Arabidopsis thaliana
AT5G11900 0.5kb downstream 0.5kb downstream 2794 true Chr5: 3833985-3836778 Arabidopsis thaliana
AT5G11900 0.5kb downstream 0.5kb downstream 500 false Chr5: 3836279-3836778 Arabidopsis thaliana
AT5G11900 1.0kb upstream 1.0kb upstream 3294 true Chr5: 3832985-3836278 Arabidopsis thaliana
AT5G11900 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3832985-3833984 Arabidopsis thaliana
AT5G11900 1.0kb downstream 1.0kb downstream 3294 true Chr5: 3833985-3837278 Arabidopsis thaliana
AT5G11900 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3836279-3837278 Arabidopsis thaliana
AT5G11900 2.0kb upstream 2.0kb upstream 4294 true Chr5: 3831985-3836278 Arabidopsis thaliana
AT5G11900 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3831985-3833984 Arabidopsis thaliana
AT5G11900 2.0kb downstream 2.0kb downstream 4294 true Chr5: 3833985-3838278 Arabidopsis thaliana
AT5G11900 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3836279-3838278 Arabidopsis thaliana
AT5G11900 5.0kb upstream 5.0kb upstream 7294 true Chr5: 3828985-3836278 Arabidopsis thaliana
AT5G11900 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3828985-3833984 Arabidopsis thaliana
AT5G11900 5.0kb downstream 5.0kb downstream 7294 true Chr5: 3833985-3841278 Arabidopsis thaliana
AT5G11900 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3836279-3841278 Arabidopsis thaliana
AT5G11900 10.0kb upstream 10.0kb upstream 12294 true Chr5: 3823985-3836278 Arabidopsis thaliana
AT5G11900 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3823985-3833984 Arabidopsis thaliana
AT5G11900 10.0kb downstream 10.0kb downstream 12294 true Chr5: 3833985-3846278 Arabidopsis thaliana
AT5G11900 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3836279-3846278 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360214 5261 Brassicaceae View MSA
123839407 5264 Brassicales-Malvales View MSA
124339408 5266 SBM View MSA
124246744 5268 Malvidae View MSA
124070344 5270 Rosid View MSA
123750636 5271 Pentapetalae View MSA
122790029 5272 Eudicot View MSA
122051404 5273 Angiosperm View MSA
121346997 5274 Embryophyte View MSA
123423903 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.509        
cufflinks 14.948        
cufflinks 10.151       Low
cufflinks 14.811        
cufflinks 9.868       Low
cufflinks 15.842       High

0 Strain