Gene : AT5G11240 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22847//PTHR22847:SF361 - WD40 REPEAT PROTEIN // JOUBERIN Genomic Order:  1047
Name:  ? AT5G11240 Secondary Identifier:  ? PAC:19668029
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G11240 0.5kb upstream 0.5kb upstream 4947 true Chr5: 3582040-3586986 Arabidopsis thaliana
AT5G11240 0.5kb upstream 0.5kb upstream 500 false Chr5: 3582040-3582539 Arabidopsis thaliana
AT5G11240 0.5kb downstream 0.5kb downstream 4947 true Chr5: 3582540-3587486 Arabidopsis thaliana
AT5G11240 0.5kb downstream 0.5kb downstream 500 false Chr5: 3586987-3587486 Arabidopsis thaliana
AT5G11240 1.0kb upstream 1.0kb upstream 5447 true Chr5: 3581540-3586986 Arabidopsis thaliana
AT5G11240 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3581540-3582539 Arabidopsis thaliana
AT5G11240 1.0kb downstream 1.0kb downstream 5447 true Chr5: 3582540-3587986 Arabidopsis thaliana
AT5G11240 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3586987-3587986 Arabidopsis thaliana
AT5G11240 2.0kb upstream 2.0kb upstream 6447 true Chr5: 3580540-3586986 Arabidopsis thaliana
AT5G11240 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3580540-3582539 Arabidopsis thaliana
AT5G11240 2.0kb downstream 2.0kb downstream 6447 true Chr5: 3582540-3588986 Arabidopsis thaliana
AT5G11240 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3586987-3588986 Arabidopsis thaliana
AT5G11240 5.0kb upstream 5.0kb upstream 9447 true Chr5: 3577540-3586986 Arabidopsis thaliana
AT5G11240 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3577540-3582539 Arabidopsis thaliana
AT5G11240 5.0kb downstream 5.0kb downstream 9447 true Chr5: 3582540-3591986 Arabidopsis thaliana
AT5G11240 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3586987-3591986 Arabidopsis thaliana
AT5G11240 10.0kb upstream 10.0kb upstream 14447 true Chr5: 3572540-3586986 Arabidopsis thaliana
AT5G11240 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3572540-3582539 Arabidopsis thaliana
AT5G11240 10.0kb downstream 10.0kb downstream 14447 true Chr5: 3582540-3596986 Arabidopsis thaliana
AT5G11240 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3586987-3596986 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371084 5261 Brassicaceae View MSA
123841020 5264 Brassicales-Malvales View MSA
124339860 5266 SBM View MSA
124241785 5268 Malvidae View MSA
124066327 5270 Rosid View MSA
123736466 5271 Pentapetalae View MSA
122792300 5272 Eudicot View MSA
122048492 5273 Angiosperm View MSA
121346834 5274 Embryophyte View MSA
123423807 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.154        
cufflinks 7.487        
cufflinks 3.641       Low
cufflinks 7.747        
cufflinks 3.211       Low
cufflinks 9.387       High

0 Strain