Gene : AT5G13980 A. thaliana TAIR10
Defline:  (1 of 3) K01191 - alpha-mannosidase (E3.2.1.24) Genomic Order:  1293
Name:  ? AT5G13980 Secondary Identifier:  ? PAC:19665959
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G13980 0.5kb upstream 0.5kb upstream 6671 true Chr5: 4507996-4514666 Arabidopsis thaliana
AT5G13980 0.5kb upstream 0.5kb upstream 500 false Chr5: 4507996-4508495 Arabidopsis thaliana
AT5G13980 0.5kb downstream 0.5kb downstream 6671 true Chr5: 4508496-4515166 Arabidopsis thaliana
AT5G13980 0.5kb downstream 0.5kb downstream 500 false Chr5: 4514667-4515166 Arabidopsis thaliana
AT5G13980 1.0kb upstream 1.0kb upstream 7171 true Chr5: 4507496-4514666 Arabidopsis thaliana
AT5G13980 1.0kb upstream 1.0kb upstream 1000 false Chr5: 4507496-4508495 Arabidopsis thaliana
AT5G13980 1.0kb downstream 1.0kb downstream 7171 true Chr5: 4508496-4515666 Arabidopsis thaliana
AT5G13980 1.0kb downstream 1.0kb downstream 1000 false Chr5: 4514667-4515666 Arabidopsis thaliana
AT5G13980 2.0kb upstream 2.0kb upstream 8171 true Chr5: 4506496-4514666 Arabidopsis thaliana
AT5G13980 2.0kb upstream 2.0kb upstream 2000 false Chr5: 4506496-4508495 Arabidopsis thaliana
AT5G13980 2.0kb downstream 2.0kb downstream 8171 true Chr5: 4508496-4516666 Arabidopsis thaliana
AT5G13980 2.0kb downstream 2.0kb downstream 2000 false Chr5: 4514667-4516666 Arabidopsis thaliana
AT5G13980 5.0kb upstream 5.0kb upstream 11171 true Chr5: 4503496-4514666 Arabidopsis thaliana
AT5G13980 5.0kb upstream 5.0kb upstream 5000 false Chr5: 4503496-4508495 Arabidopsis thaliana
AT5G13980 5.0kb downstream 5.0kb downstream 11171 true Chr5: 4508496-4519666 Arabidopsis thaliana
AT5G13980 5.0kb downstream 5.0kb downstream 5000 false Chr5: 4514667-4519666 Arabidopsis thaliana
AT5G13980 10.0kb upstream 10.0kb upstream 16171 true Chr5: 4498496-4514666 Arabidopsis thaliana
AT5G13980 10.0kb upstream 10.0kb upstream 10000 false Chr5: 4498496-4508495 Arabidopsis thaliana
AT5G13980 10.0kb downstream 10.0kb downstream 16171 true Chr5: 4508496-4524666 Arabidopsis thaliana
AT5G13980 10.0kb downstream 10.0kb downstream 10000 false Chr5: 4514667-4524666 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363586 5261 Brassicaceae View MSA
123832307 5264 Brassicales-Malvales View MSA
124337648 5266 SBM View MSA
124245807 5268 Malvidae View MSA
124072093 5270 Rosid View MSA
123740156 5271 Pentapetalae View MSA
122794150 5272 Eudicot View MSA
122044684 5273 Angiosperm View MSA
121351343 5274 Embryophyte View MSA
123424648 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.93        
cufflinks 9.774        
cufflinks 5.526       Low
cufflinks 9.496        
cufflinks 5.163       Low
cufflinks 9.398        

0 Strain