Gene : AT5G13210 A. thaliana TAIR10
Defline:  (1 of 4) PTHR31373//PTHR31373:SF0 - FAMILY NOT NAMED // EMB|CAB86628.1 Genomic Order:  1215
Name:  ? AT5G13210 Secondary Identifier:  ? PAC:19671745
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G13210 0.5kb upstream 0.5kb upstream 2683 true Chr5: 4214004-4216686 Arabidopsis thaliana
AT5G13210 0.5kb upstream 0.5kb upstream 500 false Chr5: 4214004-4214503 Arabidopsis thaliana
AT5G13210 0.5kb downstream 0.5kb downstream 2683 true Chr5: 4214504-4217186 Arabidopsis thaliana
AT5G13210 0.5kb downstream 0.5kb downstream 500 false Chr5: 4216687-4217186 Arabidopsis thaliana
AT5G13210 1.0kb upstream 1.0kb upstream 3183 true Chr5: 4213504-4216686 Arabidopsis thaliana
AT5G13210 1.0kb upstream 1.0kb upstream 1000 false Chr5: 4213504-4214503 Arabidopsis thaliana
AT5G13210 1.0kb downstream 1.0kb downstream 3183 true Chr5: 4214504-4217686 Arabidopsis thaliana
AT5G13210 1.0kb downstream 1.0kb downstream 1000 false Chr5: 4216687-4217686 Arabidopsis thaliana
AT5G13210 2.0kb upstream 2.0kb upstream 4183 true Chr5: 4212504-4216686 Arabidopsis thaliana
AT5G13210 2.0kb upstream 2.0kb upstream 2000 false Chr5: 4212504-4214503 Arabidopsis thaliana
AT5G13210 2.0kb downstream 2.0kb downstream 4183 true Chr5: 4214504-4218686 Arabidopsis thaliana
AT5G13210 2.0kb downstream 2.0kb downstream 2000 false Chr5: 4216687-4218686 Arabidopsis thaliana
AT5G13210 5.0kb upstream 5.0kb upstream 7183 true Chr5: 4209504-4216686 Arabidopsis thaliana
AT5G13210 5.0kb upstream 5.0kb upstream 5000 false Chr5: 4209504-4214503 Arabidopsis thaliana
AT5G13210 5.0kb downstream 5.0kb downstream 7183 true Chr5: 4214504-4221686 Arabidopsis thaliana
AT5G13210 5.0kb downstream 5.0kb downstream 5000 false Chr5: 4216687-4221686 Arabidopsis thaliana
AT5G13210 10.0kb upstream 10.0kb upstream 12183 true Chr5: 4204504-4216686 Arabidopsis thaliana
AT5G13210 10.0kb upstream 10.0kb upstream 10000 false Chr5: 4204504-4214503 Arabidopsis thaliana
AT5G13210 10.0kb downstream 10.0kb downstream 12183 true Chr5: 4214504-4226686 Arabidopsis thaliana
AT5G13210 10.0kb downstream 10.0kb downstream 10000 false Chr5: 4216687-4226686 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041452 5273 Angiosperm View MSA
122367218 5261 Brassicaceae View MSA
123838898 5264 Brassicales-Malvales View MSA
124349372 5266 SBM View MSA
124244202 5268 Malvidae View MSA
124064904 5270 Rosid View MSA
123749450 5271 Pentapetalae View MSA
122797220 5272 Eudicot View MSA
121346363 5274 Embryophyte View MSA
123428550 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.884        
cufflinks 2.181       Low
cufflinks 15.329       High
cufflinks 4.625        
cufflinks 17.01       High
cufflinks 2.241       Low

0 Strain