Gene : AT5G12950 A. thaliana TAIR10
Defline:  (1 of 1) K09955 - hypothetical protein (K09955) Genomic Order:  1189
Name:  ? AT5G12950 Secondary Identifier:  ? PAC:19672480
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G12950 0.5kb upstream 0.5kb upstream 4523 true Chr5: 4092453-4096975 Arabidopsis thaliana
AT5G12950 0.5kb upstream 0.5kb upstream 500 false Chr5: 4092453-4092952 Arabidopsis thaliana
AT5G12950 0.5kb downstream 0.5kb downstream 4523 true Chr5: 4092953-4097475 Arabidopsis thaliana
AT5G12950 0.5kb downstream 0.5kb downstream 500 false Chr5: 4096976-4097475 Arabidopsis thaliana
AT5G12950 1.0kb upstream 1.0kb upstream 5023 true Chr5: 4091953-4096975 Arabidopsis thaliana
AT5G12950 1.0kb upstream 1.0kb upstream 1000 false Chr5: 4091953-4092952 Arabidopsis thaliana
AT5G12950 1.0kb downstream 1.0kb downstream 5023 true Chr5: 4092953-4097975 Arabidopsis thaliana
AT5G12950 1.0kb downstream 1.0kb downstream 1000 false Chr5: 4096976-4097975 Arabidopsis thaliana
AT5G12950 2.0kb upstream 2.0kb upstream 6023 true Chr5: 4090953-4096975 Arabidopsis thaliana
AT5G12950 2.0kb upstream 2.0kb upstream 2000 false Chr5: 4090953-4092952 Arabidopsis thaliana
AT5G12950 2.0kb downstream 2.0kb downstream 6023 true Chr5: 4092953-4098975 Arabidopsis thaliana
AT5G12950 2.0kb downstream 2.0kb downstream 2000 false Chr5: 4096976-4098975 Arabidopsis thaliana
AT5G12950 5.0kb upstream 5.0kb upstream 9023 true Chr5: 4087953-4096975 Arabidopsis thaliana
AT5G12950 5.0kb upstream 5.0kb upstream 5000 false Chr5: 4087953-4092952 Arabidopsis thaliana
AT5G12950 5.0kb downstream 5.0kb downstream 9023 true Chr5: 4092953-4101975 Arabidopsis thaliana
AT5G12950 5.0kb downstream 5.0kb downstream 5000 false Chr5: 4096976-4101975 Arabidopsis thaliana
AT5G12950 10.0kb upstream 10.0kb upstream 14023 true Chr5: 4082953-4096975 Arabidopsis thaliana
AT5G12950 10.0kb upstream 10.0kb upstream 10000 false Chr5: 4082953-4092952 Arabidopsis thaliana
AT5G12950 10.0kb downstream 10.0kb downstream 14023 true Chr5: 4092953-4106975 Arabidopsis thaliana
AT5G12950 10.0kb downstream 10.0kb downstream 10000 false Chr5: 4096976-4106975 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364122 5261 Brassicaceae View MSA
123840092 5264 Brassicales-Malvales View MSA
124345310 5266 SBM View MSA
124238485 5268 Malvidae View MSA
124065776 5270 Rosid View MSA
123744456 5271 Pentapetalae View MSA
122789821 5272 Eudicot View MSA
122047782 5273 Angiosperm View MSA
121347713 5274 Embryophyte View MSA
123428347 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.758        
cufflinks 8.923       Low
cufflinks 22.97       High
cufflinks 13.402        
cufflinks 24.078       High
cufflinks 11.609        

0 Strain