Gene : AT5G15700 A. thaliana TAIR10
Defline:  (1 of 3) K10908 - DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6] (POLRMT, RPO41) Genomic Order:  1467
Name:  ? AT5G15700 Secondary Identifier:  ? PAC:19672820
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G15700 0.5kb upstream 0.5kb upstream 7041 true Chr5: 5115300-5122340 Arabidopsis thaliana
AT5G15700 0.5kb upstream 0.5kb upstream 500 false Chr5: 5121841-5122340 Arabidopsis thaliana
AT5G15700 0.5kb downstream 0.5kb downstream 7041 true Chr5: 5114800-5121840 Arabidopsis thaliana
AT5G15700 0.5kb downstream 0.5kb downstream 500 false Chr5: 5114800-5115299 Arabidopsis thaliana
AT5G15700 1.0kb upstream 1.0kb upstream 7541 true Chr5: 5115300-5122840 Arabidopsis thaliana
AT5G15700 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5121841-5122840 Arabidopsis thaliana
AT5G15700 1.0kb downstream 1.0kb downstream 7541 true Chr5: 5114300-5121840 Arabidopsis thaliana
AT5G15700 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5114300-5115299 Arabidopsis thaliana
AT5G15700 2.0kb upstream 2.0kb upstream 8541 true Chr5: 5115300-5123840 Arabidopsis thaliana
AT5G15700 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5121841-5123840 Arabidopsis thaliana
AT5G15700 2.0kb downstream 2.0kb downstream 8541 true Chr5: 5113300-5121840 Arabidopsis thaliana
AT5G15700 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5113300-5115299 Arabidopsis thaliana
AT5G15700 5.0kb upstream 5.0kb upstream 11541 true Chr5: 5115300-5126840 Arabidopsis thaliana
AT5G15700 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5121841-5126840 Arabidopsis thaliana
AT5G15700 5.0kb downstream 5.0kb downstream 11541 true Chr5: 5110300-5121840 Arabidopsis thaliana
AT5G15700 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5110300-5115299 Arabidopsis thaliana
AT5G15700 10.0kb upstream 10.0kb upstream 16541 true Chr5: 5115300-5131840 Arabidopsis thaliana
AT5G15700 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5121841-5131840 Arabidopsis thaliana
AT5G15700 10.0kb downstream 10.0kb downstream 16541 true Chr5: 5105300-5121840 Arabidopsis thaliana
AT5G15700 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5105300-5115299 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369880 5261 Brassicaceae View MSA
123832032 5264 Brassicales-Malvales View MSA
124342674 5266 SBM View MSA
124251682 5268 Malvidae View MSA
124071621 5270 Rosid View MSA
123742172 5271 Pentapetalae View MSA
122791683 5272 Eudicot View MSA
122050149 5273 Angiosperm View MSA
121347767 5274 Embryophyte View MSA
123426573 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.425        
cufflinks 1.579        
cufflinks 1.175       Low
cufflinks 1.867       High
cufflinks 1.192       Low
cufflinks 1.638        

0 Strain