Gene : HEMG2 A. thaliana TAIR10
Primary Identifier:  ? AT5G14220 Defline:  (1 of 1) PTHR10742//PTHR10742:SF229 - AMINE OXIDASE // PROTOPORPHYRINOGEN OXIDASE 2, CHLOROPLASTIC/MITOCHONDRIAL
Genomic Order:  1318 Name:  ? AT5G14220
Secondary Identifier:  ? PAC:19668157
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana CHLOROPHYLL-SYN Arabidopsis thaliana pathologic  
Athaliana HEME-BIOSYNTHESIS-II Arabidopsis thaliana pathologic  
Athaliana PWY-5918 Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G14220 0.5kb upstream 0.5kb upstream 4697 true Chr5: 4583252-4587948 Arabidopsis thaliana
AT5G14220 0.5kb upstream 0.5kb upstream 500 false Chr5: 4587449-4587948 Arabidopsis thaliana
AT5G14220 0.5kb downstream 0.5kb downstream 4697 true Chr5: 4582752-4587448 Arabidopsis thaliana
AT5G14220 0.5kb downstream 0.5kb downstream 500 false Chr5: 4582752-4583251 Arabidopsis thaliana
AT5G14220 1.0kb upstream 1.0kb upstream 5197 true Chr5: 4583252-4588448 Arabidopsis thaliana
AT5G14220 1.0kb upstream 1.0kb upstream 1000 false Chr5: 4587449-4588448 Arabidopsis thaliana
AT5G14220 1.0kb downstream 1.0kb downstream 5197 true Chr5: 4582252-4587448 Arabidopsis thaliana
AT5G14220 1.0kb downstream 1.0kb downstream 1000 false Chr5: 4582252-4583251 Arabidopsis thaliana
AT5G14220 2.0kb upstream 2.0kb upstream 6197 true Chr5: 4583252-4589448 Arabidopsis thaliana
AT5G14220 2.0kb upstream 2.0kb upstream 2000 false Chr5: 4587449-4589448 Arabidopsis thaliana
AT5G14220 2.0kb downstream 2.0kb downstream 6197 true Chr5: 4581252-4587448 Arabidopsis thaliana
AT5G14220 2.0kb downstream 2.0kb downstream 2000 false Chr5: 4581252-4583251 Arabidopsis thaliana
AT5G14220 5.0kb upstream 5.0kb upstream 9197 true Chr5: 4583252-4592448 Arabidopsis thaliana
AT5G14220 5.0kb upstream 5.0kb upstream 5000 false Chr5: 4587449-4592448 Arabidopsis thaliana
AT5G14220 5.0kb downstream 5.0kb downstream 9197 true Chr5: 4578252-4587448 Arabidopsis thaliana
AT5G14220 5.0kb downstream 5.0kb downstream 5000 false Chr5: 4578252-4583251 Arabidopsis thaliana
AT5G14220 10.0kb upstream 10.0kb upstream 14197 true Chr5: 4583252-4597448 Arabidopsis thaliana
AT5G14220 10.0kb upstream 10.0kb upstream 10000 false Chr5: 4587449-4597448 Arabidopsis thaliana
AT5G14220 10.0kb downstream 10.0kb downstream 14197 true Chr5: 4573252-4587448 Arabidopsis thaliana
AT5G14220 10.0kb downstream 10.0kb downstream 10000 false Chr5: 4573252-4583251 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377658 5261 Brassicaceae View MSA
123829368 5264 Brassicales-Malvales View MSA
124344124 5266 SBM View MSA
124241673 5268 Malvidae View MSA
124068806 5270 Rosid View MSA
123747490 5271 Pentapetalae View MSA
122787686 5272 Eudicot View MSA
122041725 5273 Angiosperm View MSA
121347394 5274 Embryophyte View MSA
123424000 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.082       High
cufflinks 3.477        
cufflinks 3.793        
cufflinks 3.349        
cufflinks 3.767        
cufflinks 2.806       Low

0 Strain