Gene : AT5G17370 A. thaliana TAIR10
Defline:  (1 of 1) K11799 - WD repeat-containing protein 21A (WDR21A) Genomic Order:  1647
Name:  ? AT5G17370 Secondary Identifier:  ? PAC:19667315
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G17370 0.5kb upstream 0.5kb upstream 3584 true Chr5: 5721636-5725219 Arabidopsis thaliana
AT5G17370 0.5kb upstream 0.5kb upstream 500 false Chr5: 5724720-5725219 Arabidopsis thaliana
AT5G17370 0.5kb downstream 0.5kb downstream 3584 true Chr5: 5721136-5724719 Arabidopsis thaliana
AT5G17370 0.5kb downstream 0.5kb downstream 500 false Chr5: 5721136-5721635 Arabidopsis thaliana
AT5G17370 1.0kb upstream 1.0kb upstream 4084 true Chr5: 5721636-5725719 Arabidopsis thaliana
AT5G17370 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5724720-5725719 Arabidopsis thaliana
AT5G17370 1.0kb downstream 1.0kb downstream 4084 true Chr5: 5720636-5724719 Arabidopsis thaliana
AT5G17370 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5720636-5721635 Arabidopsis thaliana
AT5G17370 2.0kb upstream 2.0kb upstream 5084 true Chr5: 5721636-5726719 Arabidopsis thaliana
AT5G17370 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5724720-5726719 Arabidopsis thaliana
AT5G17370 2.0kb downstream 2.0kb downstream 5084 true Chr5: 5719636-5724719 Arabidopsis thaliana
AT5G17370 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5719636-5721635 Arabidopsis thaliana
AT5G17370 5.0kb upstream 5.0kb upstream 8084 true Chr5: 5721636-5729719 Arabidopsis thaliana
AT5G17370 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5724720-5729719 Arabidopsis thaliana
AT5G17370 5.0kb downstream 5.0kb downstream 8084 true Chr5: 5716636-5724719 Arabidopsis thaliana
AT5G17370 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5716636-5721635 Arabidopsis thaliana
AT5G17370 10.0kb upstream 10.0kb upstream 13084 true Chr5: 5721636-5734719 Arabidopsis thaliana
AT5G17370 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5724720-5734719 Arabidopsis thaliana
AT5G17370 10.0kb downstream 10.0kb downstream 13084 true Chr5: 5711636-5724719 Arabidopsis thaliana
AT5G17370 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5711636-5721635 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364762 5261 Brassicaceae View MSA
123831623 5264 Brassicales-Malvales View MSA
124340905 5266 SBM View MSA
124238060 5268 Malvidae View MSA
124061482 5270 Rosid View MSA
123740611 5271 Pentapetalae View MSA
122787574 5272 Eudicot View MSA
122044538 5273 Angiosperm View MSA
121346276 5274 Embryophyte View MSA
123380359 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.337        
cufflinks 5.36       High
cufflinks 2.307        
cufflinks 4.342        
cufflinks 2.28        
cufflinks 4.551        

0 Strain