Gene : RVE1 A. thaliana TAIR10
Primary Identifier:  ? AT5G17300 Defline:  (1 of 2) PTHR12802//PTHR12802:SF60 - SWI/SNF COMPLEX-RELATED // PROTEIN REVEILLE 1-RELATED
Genomic Order:  1640 Name:  ? AT5G17300
Secondary Identifier:  ? PAC:19669085
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G17300 0.5kb upstream 0.5kb upstream 3176 true Chr5: 5690227-5693402 Arabidopsis thaliana
AT5G17300 0.5kb upstream 0.5kb upstream 500 false Chr5: 5692903-5693402 Arabidopsis thaliana
AT5G17300 0.5kb downstream 0.5kb downstream 3176 true Chr5: 5689727-5692902 Arabidopsis thaliana
AT5G17300 0.5kb downstream 0.5kb downstream 500 false Chr5: 5689727-5690226 Arabidopsis thaliana
AT5G17300 1.0kb upstream 1.0kb upstream 3676 true Chr5: 5690227-5693902 Arabidopsis thaliana
AT5G17300 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5692903-5693902 Arabidopsis thaliana
AT5G17300 1.0kb downstream 1.0kb downstream 3676 true Chr5: 5689227-5692902 Arabidopsis thaliana
AT5G17300 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5689227-5690226 Arabidopsis thaliana
AT5G17300 2.0kb upstream 2.0kb upstream 4676 true Chr5: 5690227-5694902 Arabidopsis thaliana
AT5G17300 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5692903-5694902 Arabidopsis thaliana
AT5G17300 2.0kb downstream 2.0kb downstream 4676 true Chr5: 5688227-5692902 Arabidopsis thaliana
AT5G17300 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5688227-5690226 Arabidopsis thaliana
AT5G17300 5.0kb upstream 5.0kb upstream 7676 true Chr5: 5690227-5697902 Arabidopsis thaliana
AT5G17300 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5692903-5697902 Arabidopsis thaliana
AT5G17300 5.0kb downstream 5.0kb downstream 7676 true Chr5: 5685227-5692902 Arabidopsis thaliana
AT5G17300 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5685227-5690226 Arabidopsis thaliana
AT5G17300 10.0kb upstream 10.0kb upstream 12676 true Chr5: 5690227-5702902 Arabidopsis thaliana
AT5G17300 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5692903-5702902 Arabidopsis thaliana
AT5G17300 10.0kb downstream 10.0kb downstream 12676 true Chr5: 5680227-5692902 Arabidopsis thaliana
AT5G17300 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5680227-5690226 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375574 5261 Brassicaceae View MSA
123800995 5264 Brassicales-Malvales View MSA
124350530 5266 SBM View MSA
124252836 5268 Malvidae View MSA
124069733 5270 Rosid View MSA
123742817 5271 Pentapetalae View MSA
122794763 5272 Eudicot View MSA
122048957 5273 Angiosperm View MSA
121311186 5274 Embryophyte View MSA
123427162 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.875        
cufflinks 1.097        
cufflinks 0.887        
cufflinks 2.618       High
cufflinks 0.689       Low
cufflinks 1.472        

0 Strain