Gene : ARFB1B A. thaliana TAIR10
Primary Identifier:  ? AT5G17060 Defline:  (1 of 1) PTHR11711:SF200 - ADP-RIBOSYLATION FACTOR B1B
Genomic Order:  1612 Name:  ? AT5G17060
Secondary Identifier:  ? PAC:19668717
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G17060 0.5kb upstream 0.5kb upstream 2760 true Chr5: 5610306-5613065 Arabidopsis thaliana
AT5G17060 0.5kb upstream 0.5kb upstream 500 false Chr5: 5610306-5610805 Arabidopsis thaliana
AT5G17060 0.5kb downstream 0.5kb downstream 2760 true Chr5: 5610806-5613565 Arabidopsis thaliana
AT5G17060 0.5kb downstream 0.5kb downstream 500 false Chr5: 5613066-5613565 Arabidopsis thaliana
AT5G17060 1.0kb upstream 1.0kb upstream 3260 true Chr5: 5609806-5613065 Arabidopsis thaliana
AT5G17060 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5609806-5610805 Arabidopsis thaliana
AT5G17060 1.0kb downstream 1.0kb downstream 3260 true Chr5: 5610806-5614065 Arabidopsis thaliana
AT5G17060 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5613066-5614065 Arabidopsis thaliana
AT5G17060 2.0kb upstream 2.0kb upstream 4260 true Chr5: 5608806-5613065 Arabidopsis thaliana
AT5G17060 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5608806-5610805 Arabidopsis thaliana
AT5G17060 2.0kb downstream 2.0kb downstream 4260 true Chr5: 5610806-5615065 Arabidopsis thaliana
AT5G17060 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5613066-5615065 Arabidopsis thaliana
AT5G17060 5.0kb upstream 5.0kb upstream 7260 true Chr5: 5605806-5613065 Arabidopsis thaliana
AT5G17060 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5605806-5610805 Arabidopsis thaliana
AT5G17060 5.0kb downstream 5.0kb downstream 7260 true Chr5: 5610806-5618065 Arabidopsis thaliana
AT5G17060 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5613066-5618065 Arabidopsis thaliana
AT5G17060 10.0kb upstream 10.0kb upstream 12260 true Chr5: 5600806-5613065 Arabidopsis thaliana
AT5G17060 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5600806-5610805 Arabidopsis thaliana
AT5G17060 10.0kb downstream 10.0kb downstream 12260 true Chr5: 5610806-5623065 Arabidopsis thaliana
AT5G17060 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5613066-5623065 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369985 5261 Brassicaceae View MSA
123836388 5264 Brassicales-Malvales View MSA
124341051 5266 SBM View MSA
124245855 5268 Malvidae View MSA
124066140 5270 Rosid View MSA
123749210 5271 Pentapetalae View MSA
122787035 5272 Eudicot View MSA
122049759 5273 Angiosperm View MSA
123429166 5275 Viridiplantae View MSA
121351098 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.635        
cufflinks 5.808        
cufflinks 4.222       Low
cufflinks 7.636       High
cufflinks 5.11        
cufflinks 6.413        

0 Strain