Gene : AT5G15880 A. thaliana TAIR10
Genomic Order:  1488 Name:  ? AT5G15880
Secondary Identifier:  ? PAC:19667062
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G15880 0.5kb upstream 0.5kb upstream 2429 true Chr5: 5185278-5187706 Arabidopsis thaliana
AT5G15880 0.5kb upstream 0.5kb upstream 500 false Chr5: 5185278-5185777 Arabidopsis thaliana
AT5G15880 0.5kb downstream 0.5kb downstream 2429 true Chr5: 5185778-5188206 Arabidopsis thaliana
AT5G15880 0.5kb downstream 0.5kb downstream 500 false Chr5: 5187707-5188206 Arabidopsis thaliana
AT5G15880 1.0kb upstream 1.0kb upstream 2929 true Chr5: 5184778-5187706 Arabidopsis thaliana
AT5G15880 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5184778-5185777 Arabidopsis thaliana
AT5G15880 1.0kb downstream 1.0kb downstream 2929 true Chr5: 5185778-5188706 Arabidopsis thaliana
AT5G15880 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5187707-5188706 Arabidopsis thaliana
AT5G15880 2.0kb upstream 2.0kb upstream 3929 true Chr5: 5183778-5187706 Arabidopsis thaliana
AT5G15880 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5183778-5185777 Arabidopsis thaliana
AT5G15880 2.0kb downstream 2.0kb downstream 3929 true Chr5: 5185778-5189706 Arabidopsis thaliana
AT5G15880 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5187707-5189706 Arabidopsis thaliana
AT5G15880 5.0kb upstream 5.0kb upstream 6929 true Chr5: 5180778-5187706 Arabidopsis thaliana
AT5G15880 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5180778-5185777 Arabidopsis thaliana
AT5G15880 5.0kb downstream 5.0kb downstream 6929 true Chr5: 5185778-5192706 Arabidopsis thaliana
AT5G15880 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5187707-5192706 Arabidopsis thaliana
AT5G15880 10.0kb upstream 10.0kb upstream 11929 true Chr5: 5175778-5187706 Arabidopsis thaliana
AT5G15880 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5175778-5185777 Arabidopsis thaliana
AT5G15880 10.0kb downstream 10.0kb downstream 11929 true Chr5: 5185778-5197706 Arabidopsis thaliana
AT5G15880 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5187707-5197706 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361200 5261 Brassicaceae View MSA
123840852 5264 Brassicales-Malvales View MSA
124343072 5266 SBM View MSA
124242557 5268 Malvidae View MSA
124068218 5270 Rosid View MSA
123751999 5271 Pentapetalae View MSA
122791735 5272 Eudicot View MSA
122051178 5273 Angiosperm View MSA
121346962 5274 Embryophyte View MSA
123427166 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.353        
cufflinks 12.339        
cufflinks 8.353       Low
cufflinks 13.27        
cufflinks 8.71        
cufflinks 13.406       High

0 Strain