Gene : PIR121 A. thaliana TAIR10
Primary Identifier:  ? AT5G18410 Defline:  (1 of 1) K05749 - cytoplasmic FMR1 interacting protein (CYFIP)
Genomic Order:  1759 Name:  ? AT5G18410
Secondary Identifier:  ? PAC:19666689
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G18410 0.5kb upstream 0.5kb upstream 8261 true Chr5: 6097271-6105531 Arabidopsis thaliana
AT5G18410 0.5kb upstream 0.5kb upstream 500 false Chr5: 6105032-6105531 Arabidopsis thaliana
AT5G18410 0.5kb downstream 0.5kb downstream 8261 true Chr5: 6096771-6105031 Arabidopsis thaliana
AT5G18410 0.5kb downstream 0.5kb downstream 500 false Chr5: 6096771-6097270 Arabidopsis thaliana
AT5G18410 1.0kb upstream 1.0kb upstream 8761 true Chr5: 6097271-6106031 Arabidopsis thaliana
AT5G18410 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6105032-6106031 Arabidopsis thaliana
AT5G18410 1.0kb downstream 1.0kb downstream 8761 true Chr5: 6096271-6105031 Arabidopsis thaliana
AT5G18410 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6096271-6097270 Arabidopsis thaliana
AT5G18410 2.0kb upstream 2.0kb upstream 9761 true Chr5: 6097271-6107031 Arabidopsis thaliana
AT5G18410 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6105032-6107031 Arabidopsis thaliana
AT5G18410 2.0kb downstream 2.0kb downstream 9761 true Chr5: 6095271-6105031 Arabidopsis thaliana
AT5G18410 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6095271-6097270 Arabidopsis thaliana
AT5G18410 5.0kb upstream 5.0kb upstream 12761 true Chr5: 6097271-6110031 Arabidopsis thaliana
AT5G18410 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6105032-6110031 Arabidopsis thaliana
AT5G18410 5.0kb downstream 5.0kb downstream 12761 true Chr5: 6092271-6105031 Arabidopsis thaliana
AT5G18410 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6092271-6097270 Arabidopsis thaliana
AT5G18410 10.0kb upstream 10.0kb upstream 17761 true Chr5: 6097271-6115031 Arabidopsis thaliana
AT5G18410 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6105032-6115031 Arabidopsis thaliana
AT5G18410 10.0kb downstream 10.0kb downstream 17761 true Chr5: 6087271-6105031 Arabidopsis thaliana
AT5G18410 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6087271-6097270 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047332 5273 Angiosperm View MSA
122369882 5261 Brassicaceae View MSA
123829275 5264 Brassicales-Malvales View MSA
124342049 5266 SBM View MSA
124242116 5268 Malvidae View MSA
124065928 5270 Rosid View MSA
123737090 5271 Pentapetalae View MSA
122792740 5272 Eudicot View MSA
121351207 5274 Embryophyte View MSA
123426816 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.625        
cufflinks 4.277        
cufflinks 2.344        
cufflinks 4.234        
cufflinks 2.119       Low
cufflinks 5.012       High

0 Strain