Gene : AT5G18140 A. thaliana TAIR10
Defline:  (1 of 5) PTHR24078//PTHR24078:SF231 - DNAJ HOMOLOG SUBFAMILY C MEMBER // CHAPERONE PROTEIN DNAJ Genomic Order:  1728
Name:  ? AT5G18140 Secondary Identifier:  ? PAC:19666971
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G18140 0.5kb upstream 0.5kb upstream 2214 true Chr5: 5997675-5999888 Arabidopsis thaliana
AT5G18140 0.5kb upstream 0.5kb upstream 500 false Chr5: 5997675-5998174 Arabidopsis thaliana
AT5G18140 0.5kb downstream 0.5kb downstream 2214 true Chr5: 5998175-6000388 Arabidopsis thaliana
AT5G18140 0.5kb downstream 0.5kb downstream 500 false Chr5: 5999889-6000388 Arabidopsis thaliana
AT5G18140 1.0kb upstream 1.0kb upstream 2714 true Chr5: 5997175-5999888 Arabidopsis thaliana
AT5G18140 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5997175-5998174 Arabidopsis thaliana
AT5G18140 1.0kb downstream 1.0kb downstream 2714 true Chr5: 5998175-6000888 Arabidopsis thaliana
AT5G18140 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5999889-6000888 Arabidopsis thaliana
AT5G18140 2.0kb upstream 2.0kb upstream 3714 true Chr5: 5996175-5999888 Arabidopsis thaliana
AT5G18140 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5996175-5998174 Arabidopsis thaliana
AT5G18140 2.0kb downstream 2.0kb downstream 3714 true Chr5: 5998175-6001888 Arabidopsis thaliana
AT5G18140 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5999889-6001888 Arabidopsis thaliana
AT5G18140 5.0kb upstream 5.0kb upstream 6714 true Chr5: 5993175-5999888 Arabidopsis thaliana
AT5G18140 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5993175-5998174 Arabidopsis thaliana
AT5G18140 5.0kb downstream 5.0kb downstream 6714 true Chr5: 5998175-6004888 Arabidopsis thaliana
AT5G18140 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5999889-6004888 Arabidopsis thaliana
AT5G18140 10.0kb upstream 10.0kb upstream 11714 true Chr5: 5988175-5999888 Arabidopsis thaliana
AT5G18140 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5988175-5998174 Arabidopsis thaliana
AT5G18140 10.0kb downstream 10.0kb downstream 11714 true Chr5: 5998175-6009888 Arabidopsis thaliana
AT5G18140 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5999889-6009888 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369247 5261 Brassicaceae View MSA
123835445 5264 Brassicales-Malvales View MSA
124340087 5266 SBM View MSA
124243416 5268 Malvidae View MSA
124063969 5270 Rosid View MSA
123739707 5271 Pentapetalae View MSA
122787245 5272 Eudicot View MSA
122041562 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121346484 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.387       High
cufflinks 6.033        
cufflinks 13.21        
cufflinks 6.479        
cufflinks 15.533        
cufflinks 4.424       Low

0 Strain