Gene : AT5G17780 A. thaliana TAIR10
Defline:  (1 of 6) 2.3.1.12 - Dihydrolipoyllysine-residue acetyltransferase / Transacetylase X Genomic Order:  1689
Name:  ? AT5G17780 Secondary Identifier:  ? PAC:19672974
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5173 Arabidopsis thaliana pathologic  
Athaliana PWY-5464 Arabidopsis thaliana pathologic  
Athaliana PYRUVDEHYD-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G17780 0.5kb upstream 0.5kb upstream 2268 true Chr5: 5867283-5869550 Arabidopsis thaliana
AT5G17780 0.5kb upstream 0.5kb upstream 500 false Chr5: 5869051-5869550 Arabidopsis thaliana
AT5G17780 0.5kb downstream 0.5kb downstream 2268 true Chr5: 5866783-5869050 Arabidopsis thaliana
AT5G17780 0.5kb downstream 0.5kb downstream 500 false Chr5: 5866783-5867282 Arabidopsis thaliana
AT5G17780 1.0kb upstream 1.0kb upstream 2768 true Chr5: 5867283-5870050 Arabidopsis thaliana
AT5G17780 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5869051-5870050 Arabidopsis thaliana
AT5G17780 1.0kb downstream 1.0kb downstream 2768 true Chr5: 5866283-5869050 Arabidopsis thaliana
AT5G17780 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5866283-5867282 Arabidopsis thaliana
AT5G17780 2.0kb upstream 2.0kb upstream 3768 true Chr5: 5867283-5871050 Arabidopsis thaliana
AT5G17780 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5869051-5871050 Arabidopsis thaliana
AT5G17780 2.0kb downstream 2.0kb downstream 3768 true Chr5: 5865283-5869050 Arabidopsis thaliana
AT5G17780 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5865283-5867282 Arabidopsis thaliana
AT5G17780 5.0kb upstream 5.0kb upstream 6768 true Chr5: 5867283-5874050 Arabidopsis thaliana
AT5G17780 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5869051-5874050 Arabidopsis thaliana
AT5G17780 5.0kb downstream 5.0kb downstream 6768 true Chr5: 5862283-5869050 Arabidopsis thaliana
AT5G17780 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5862283-5867282 Arabidopsis thaliana
AT5G17780 10.0kb upstream 10.0kb upstream 11768 true Chr5: 5867283-5879050 Arabidopsis thaliana
AT5G17780 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5869051-5879050 Arabidopsis thaliana
AT5G17780 10.0kb downstream 10.0kb downstream 11768 true Chr5: 5857283-5869050 Arabidopsis thaliana
AT5G17780 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5857283-5867282 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371700 5261 Brassicaceae View MSA
123838380 5264 Brassicales-Malvales View MSA
124343466 5266 SBM View MSA
124244385 5268 Malvidae View MSA
124065025 5270 Rosid View MSA
123742866 5271 Pentapetalae View MSA
122790371 5272 Eudicot View MSA
122045603 5273 Angiosperm View MSA
121349939 5274 Embryophyte View MSA
123428460 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.176     Low  
cufflinks 0.133     Low  
cufflinks 0.319        
cufflinks 0.176     Low  
cufflinks 0.54       High
cufflinks 0.087     Low Low

0 Strain