Gene : NPH4 A. thaliana TAIR10
Primary Identifier:  ? AT5G20730 Defline:  (1 of 2) PTHR31384:SF21 - AUXIN RESPONSE FACTOR 19-RELATED
Genomic Order:  2009 Name:  ? AT5G20730
Secondary Identifier:  ? PAC:19666706
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G20730 0.5kb upstream 0.5kb upstream 6169 true Chr5: 7016445-7022613 Arabidopsis thaliana
AT5G20730 0.5kb upstream 0.5kb upstream 500 false Chr5: 7022114-7022613 Arabidopsis thaliana
AT5G20730 0.5kb downstream 0.5kb downstream 6169 true Chr5: 7015945-7022113 Arabidopsis thaliana
AT5G20730 0.5kb downstream 0.5kb downstream 500 false Chr5: 7015945-7016444 Arabidopsis thaliana
AT5G20730 1.0kb upstream 1.0kb upstream 6669 true Chr5: 7016445-7023113 Arabidopsis thaliana
AT5G20730 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7022114-7023113 Arabidopsis thaliana
AT5G20730 1.0kb downstream 1.0kb downstream 6669 true Chr5: 7015445-7022113 Arabidopsis thaliana
AT5G20730 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7015445-7016444 Arabidopsis thaliana
AT5G20730 2.0kb upstream 2.0kb upstream 7669 true Chr5: 7016445-7024113 Arabidopsis thaliana
AT5G20730 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7022114-7024113 Arabidopsis thaliana
AT5G20730 2.0kb downstream 2.0kb downstream 7669 true Chr5: 7014445-7022113 Arabidopsis thaliana
AT5G20730 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7014445-7016444 Arabidopsis thaliana
AT5G20730 5.0kb upstream 5.0kb upstream 10669 true Chr5: 7016445-7027113 Arabidopsis thaliana
AT5G20730 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7022114-7027113 Arabidopsis thaliana
AT5G20730 5.0kb downstream 5.0kb downstream 10669 true Chr5: 7011445-7022113 Arabidopsis thaliana
AT5G20730 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7011445-7016444 Arabidopsis thaliana
AT5G20730 10.0kb upstream 10.0kb upstream 15669 true Chr5: 7016445-7032113 Arabidopsis thaliana
AT5G20730 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7022114-7032113 Arabidopsis thaliana
AT5G20730 10.0kb downstream 10.0kb downstream 15669 true Chr5: 7006445-7022113 Arabidopsis thaliana
AT5G20730 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7006445-7016444 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361440 5261 Brassicaceae View MSA
123840028 5264 Brassicales-Malvales View MSA
124351117 5266 SBM View MSA
124251074 5268 Malvidae View MSA
124073682 5270 Rosid View MSA
123741284 5271 Pentapetalae View MSA
122791344 5272 Eudicot View MSA
122042731 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.088        
cufflinks 4.889        
cufflinks 3.231       Low
cufflinks 4.967        
cufflinks 3.829        
cufflinks 4.566        

0 Strain