Gene : UBQ4 A. thaliana TAIR10
Primary Identifier:  ? AT5G20620 Defline:  (1 of 1) PTHR10666//PTHR10666:SF155 - UBIQUITIN // POLYUBIQUITIN 4
Genomic Order:  1997 Name:  ? AT5G20620
Secondary Identifier:  ? PAC:19666339
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G20620 0.5kb upstream 0.5kb upstream 2376 true Chr5: 6973071-6975446 Arabidopsis thaliana
AT5G20620 0.5kb upstream 0.5kb upstream 500 false Chr5: 6974947-6975446 Arabidopsis thaliana
AT5G20620 0.5kb downstream 0.5kb downstream 2376 true Chr5: 6972571-6974946 Arabidopsis thaliana
AT5G20620 0.5kb downstream 0.5kb downstream 500 false Chr5: 6972571-6973070 Arabidopsis thaliana
AT5G20620 1.0kb upstream 1.0kb upstream 2876 true Chr5: 6973071-6975946 Arabidopsis thaliana
AT5G20620 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6974947-6975946 Arabidopsis thaliana
AT5G20620 1.0kb downstream 1.0kb downstream 2876 true Chr5: 6972071-6974946 Arabidopsis thaliana
AT5G20620 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6972071-6973070 Arabidopsis thaliana
AT5G20620 2.0kb upstream 2.0kb upstream 3876 true Chr5: 6973071-6976946 Arabidopsis thaliana
AT5G20620 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6974947-6976946 Arabidopsis thaliana
AT5G20620 2.0kb downstream 2.0kb downstream 3876 true Chr5: 6971071-6974946 Arabidopsis thaliana
AT5G20620 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6971071-6973070 Arabidopsis thaliana
AT5G20620 5.0kb upstream 5.0kb upstream 6876 true Chr5: 6973071-6979946 Arabidopsis thaliana
AT5G20620 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6974947-6979946 Arabidopsis thaliana
AT5G20620 5.0kb downstream 5.0kb downstream 6876 true Chr5: 6968071-6974946 Arabidopsis thaliana
AT5G20620 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6968071-6973070 Arabidopsis thaliana
AT5G20620 10.0kb upstream 10.0kb upstream 11876 true Chr5: 6973071-6984946 Arabidopsis thaliana
AT5G20620 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6974947-6984946 Arabidopsis thaliana
AT5G20620 10.0kb downstream 10.0kb downstream 11876 true Chr5: 6963071-6974946 Arabidopsis thaliana
AT5G20620 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6963071-6973070 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029747 5273 Angiosperm View MSA
124071531 5270 Rosid View MSA
122338441 5261 Brassicaceae View MSA
123779016 5264 Brassicales-Malvales View MSA
124277350 5266 SBM View MSA
124247979 5268 Malvidae View MSA
123752540 5271 Pentapetalae View MSA
122796500 5272 Eudicot View MSA
121351277 5274 Embryophyte View MSA
123428084 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.212     High  
cufflinks 49.053     High  
cufflinks 38.98     High Low
cufflinks 55.298     High High
cufflinks 44.418     High  
cufflinks 39.412     High Low

0 Strain